Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU4-66P-201ENST00000365199 138 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNY3P13-201ENST00000365542 102 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNU2-62P-201ENST00000410868 191 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNU2-41P-201ENST00000410991 178 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 GTF2IP20-201ENST00000431663 360 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC091951.2-201ENST00000500762 203 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC105417.1-201ENST00000514691 285 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AC022616.6-201ENST00000520479 119 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 OR5BN1P-201ENST00000532955 829 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 MIR4769-201ENST00000584126 77 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 UBE2V2P2-201ENST00000587677 504 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AL355812.1-201ENST00000603215 216 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 BNIP3P10-201ENST00000605360 577 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 DISC2.1-201ENST00000612827 205 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AL159972.1-201ENST00000625150 448 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.88□□□□□ -1.95
CACNA1FO60840 Y_RNA.255-201ENST00000364581 97 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CACNA1FO60840 RNU2-39P-201ENST00000410604 198 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 RNU4-53P-201ENST00000410828 140 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 MTATP6P18-201ENST00000417994 673 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC005517.2-201ENST00000424673 553 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AL049734.2-201ENST00000441066 616 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC104563.1-201ENST00000476147 376 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 TRBV12-1-201ENST00000479785 344 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 OR5H5P-201ENST00000503164 928 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 RNU1-61P-201ENST00000516107 151 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.88□□□□□ -1.95
CACNA1FO60840 AP003072.2-201ENST00000527756 676 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1FO60840 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.88□□□□□ -1.95
CACNA1FO60840 MIR4504-201ENST00000577413 92 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 MIR3146-201ENST00000580367 79 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC060771.1-201ENST00000582031 164 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC010133.1-201ENST00000615809 842 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 AC024940.5-201ENST00000622889 474 ntBASIC2.88□□□□□ -1.95
CACNA1FO60840 FER-210ENST00000628534 558 ntTSL 5 BASIC2.88□□□□□ -1.95
CACNA1FO60840 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.88□□□□□ -1.95
CACNA1FO60840 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.279-201ENST00000364763 95 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.535-201ENST00000384612 99 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.87□□□□□ -1.95
CACNA1FO60840 RPS15AP12-201ENST00000419498 388 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 FDX1P2-201ENST00000450769 375 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC104308.1-201ENST00000454621 333 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RPS20P20-201ENST00000460498 340 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC023194.1-201ENST00000493084 308 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 KLHL2P1-201ENST00000508691 521 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC010265.1-201ENST00000513509 211 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.693-201ENST00000516641 110 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RNU7-30P-201ENST00000516835 62 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RNU6-410P-201ENST00000517006 107 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 MIR1273D-201ENST00000577266 86 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC243960.4-201ENST00000600532 288 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 YWHAQP7-201ENST00000603536 658 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC055876.5-201ENST00000605667 259 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AP001330.5-201ENST00000607176 411 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RMST_3.1-201ENST00000611651 109 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC079597.1-201ENST00000624306 508 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AL359697.1-201ENST00000624879 587 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.87□□□□□ -1.95
CACNA1FO60840 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.157-201ENST00000363638 102 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.529-201ENST00000384586 119 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 Y_RNA.548-201ENST00000384656 105 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC016769.3-201ENST00000396562 315 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RNU4-65P-201ENST00000410473 140 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AL139156.1-201ENST00000412785 841 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 PSMA6P3-201ENST00000428242 164 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.87□□□□□ -1.95
CACNA1FO60840 RPS15AP9-201ENST00000439856 381 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RPL7P12-201ENST00000446719 750 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC055855.1-201ENST00000489563 579 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 ANXA2P1-201ENST00000505539 926 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 SNORD60.2-201ENST00000516883 86 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RNU6-714P-201ENST00000516963 103 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.87□□□□□ -1.95
CACNA1FO60840 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.87□□□□□ -1.95
CACNA1FO60840 AC098848.2-201ENST00000588023 330 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms