Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC012181.1-201ENST00000479895 423 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 RPL23AP55-201ENST00000498163 452 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.89□□□□□ -1.95
LMX1BO60663 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.89□□□□□ -1.95
LMX1BO60663 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.89□□□□□ -1.95
LMX1BO60663 RNU6-390P-201ENST00000516259 103 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 Y_RNA.682-201ENST00000516457 100 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AP003072.1-201ENST00000531740 145 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.89□□□□□ -1.95
LMX1BO60663 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.89□□□□□ -1.95
LMX1BO60663 FRG2DP-202ENST00000566967 323 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.89□□□□□ -1.95
LMX1BO60663 MIR3186-201ENST00000577404 85 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.89□□□□□ -1.95
LMX1BO60663 AC174048.1-201ENST00000603389 144 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC092747.3-201ENST00000603769 301 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC009570.1-201ENST00000609599 745 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC126177.8-201ENST00000618339 1015 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 MTND5P42-201ENST00000637720 498 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 AC017071.1-201ENST00000564407 2204 ntBASIC2.89□□□□□ -1.95
LMX1BO60663 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LMX1BO60663 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LMX1BO60663 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.89□□□□□ -1.95
LMX1BO60663 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMX1BO60663 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.88□□□□□ -1.95
LMX1BO60663 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.88□□□□□ -1.95
LMX1BO60663 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.88□□□□□ -1.95
LMX1BO60663 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
LMX1BO60663 Y_RNA.135-201ENST00000363439 95 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 Y_RNA.212-201ENST00000364177 102 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.88□□□□□ -1.95
LMX1BO60663 RNU6-1074P-201ENST00000383995 104 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RNU6-43P-201ENST00000384302 107 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 Y_RNA.500-201ENST00000384466 111 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 SNORD70.1-201ENST00000391007 85 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RN7SKP158-201ENST00000410453 326 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RPS15AP6-201ENST00000420703 385 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 SKA2P1-201ENST00000425592 390 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.88□□□□□ -1.95
LMX1BO60663 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.88□□□□□ -1.95
LMX1BO60663 AC104058.1-201ENST00000448028 297 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.88□□□□□ -1.95
LMX1BO60663 AC087884.1-201ENST00000469738 328 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 VN1R17P-201ENST00000472048 1090 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC096576.1-201ENST00000489014 359 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 MTCO1P29-201ENST00000496868 288 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC093663.1-201ENST00000497190 394 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC005741.1-201ENST00000511094 432 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.88□□□□□ -1.95
LMX1BO60663 RNU2-69P-201ENST00000516061 100 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RNU6-566P-201ENST00000516790 107 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 Y_RNA.718-201ENST00000517110 102 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RANP3-201ENST00000530970 276 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.88□□□□□ -1.95
LMX1BO60663 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.88□□□□□ -1.95
LMX1BO60663 AC093249.1-201ENST00000567049 203 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 MIR5680-201ENST00000577577 84 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AC104763.2-201ENST00000604179 382 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 SDR42E1P2-201ENST00000614861 481 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.88□□□□□ -1.95
LMX1BO60663 MTND4LP32-201ENST00000636111 270 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LMX1BO60663 SRP72P2-201ENST00000344851 1979 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AL356274.2-201ENST00000624379 3752 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 AP001350.1-201ENST00000601906 1524 ntBASIC2.88□□□□□ -1.95
LMX1BO60663 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LMX1BO60663 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
LMX1BO60663 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.87□□□□□ -1.95
LMX1BO60663 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LMX1BO60663 AC091152.2-201ENST00000591628 2569 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LMX1BO60663 SNORD113-7-201ENST00000363762 77 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6-371P-201ENST00000364283 108 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 Y_RNA.259-201ENST00000364619 101 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6-715P-201ENST00000365204 103 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 Y_RNA.431-201ENST00000384086 102 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6-474P-201ENST00000384243 107 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 Y_RNA.579-201ENST00000390939 94 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 EIF4E2P1-201ENST00000393781 255 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 CISD1P1-201ENST00000393907 327 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 UBA52P6-201ENST00000399822 382 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 MIR548F5-201ENST00000408421 86 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.87□□□□□ -1.95
LMX1BO60663 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 AC236972.1-201ENST00000433225 199 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.87□□□□□ -1.95
LMX1BO60663 HMGN2P21-201ENST00000447764 270 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU7-152P-201ENST00000458982 64 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 TRBVA-201ENST00000498804 316 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 MTND5P5-201ENST00000503764 376 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6-189P-201ENST00000516120 101 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 RNU6-256P-201ENST00000516747 97 ntBASIC2.87□□□□□ -1.95
LMX1BO60663 SNORA31.20-201ENST00000517111 133 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms