Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-55P-201ENST00000411092 107 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 RNU6-954P-201ENST00000411355 107 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.95□□□□□ -1.94
ZIC3O60481 RPL35AP12-201ENST00000425362 338 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.95□□□□□ -1.94
ZIC3O60481 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.95□□□□□ -1.94
ZIC3O60481 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.95□□□□□ -1.94
ZIC3O60481 SNRPEP8-201ENST00000442866 260 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 RPL7P12-201ENST00000446719 750 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AL590664.1-201ENST00000448065 339 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC087884.1-201ENST00000469738 328 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.95□□□□□ -1.94
ZIC3O60481 RNU4-49P-201ENST00000516080 140 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 SNORA14.1-201ENST00000516113 141 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 RNU6-928P-201ENST00000516876 104 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC025755.1-201ENST00000521306 278 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
ZIC3O60481 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.95□□□□□ -1.94
ZIC3O60481 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.95□□□□□ -1.94
ZIC3O60481 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZIC3O60481 AC087241.2-201ENST00000535801 324 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.95□□□□□ -1.94
ZIC3O60481 MIR3609-201ENST00000582661 80 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 ATP1B3P1-201ENST00000605365 821 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC002076.2-201ENST00000617362 122 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 PLCE1P1-201ENST00000622094 305 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 AC092628.2-201ENST00000622492 339 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ZIC3O60481 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ZIC3O60481 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ZIC3O60481 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZIC3O60481 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
ZIC3O60481 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.95□□□□□ -1.94
ZIC3O60481 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZIC3O60481 AC093908.1-201ENST00000623125 8092 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 PWAR6-201ENST00000552334 4618 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZIC3O60481 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ZIC3O60481 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.94□□□□□ -1.94
ZIC3O60481 Y_RNA.414-201ENST00000384011 101 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ZIC3O60481 SNORA40C-201ENST00000391285 128 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNA5SP229-201ENST00000410809 99 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AL592148.1-201ENST00000413568 445 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 SNRPEP4-201ENST00000435815 279 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 BRK1P2-201ENST00000442875 223 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
ZIC3O60481 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.94□□□□□ -1.94
ZIC3O60481 SSXP4-201ENST00000451349 245 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNU6-329P-201ENST00000459618 107 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.94□□□□□ -1.94
ZIC3O60481 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.94□□□□□ -1.94
ZIC3O60481 PHBP14-201ENST00000512887 367 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNU1-86P-201ENST00000516108 154 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNU1-107P-201ENST00000516617 154 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RNU6-703P-201ENST00000516946 107 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 SNORA25.17-201ENST00000517184 124 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.94□□□□□ -1.94
ZIC3O60481 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.94□□□□□ -1.94
ZIC3O60481 AC243972.3-201ENST00000539655 198 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AC011602.1-201ENST00000546484 331 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 MIR2682-201ENST00000580305 110 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 MIR4742-201ENST00000581069 85 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 MIR3941-201ENST00000582572 103 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 MIR5195-201ENST00000583555 115 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AC005261.5-201ENST00000596280 355 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZIC3O60481 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AC093913.1-201ENST00000614178 329 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AL157817.1-201ENST00000614264 790 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 RMST_4.1-201ENST00000616886 107 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AL031601.2-202ENST00000622650 282 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 AC005858.4-201ENST00000623191 700 ntBASIC2.94□□□□□ -1.94
ZIC3O60481 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.94□□□□□ -1.94
ZIC3O60481 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZIC3O60481 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZIC3O60481 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
ZIC3O60481 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 MIR412-201ENST00000362142 91 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 RNU6-254P-201ENST00000363377 107 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 RNU6-384P-201ENST00000364900 104 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 SNORD81.2-201ENST00000365153 76 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 Y_RNA.480-201ENST00000384364 102 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 RNU6-1009P-201ENST00000390996 107 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 RN7SKP32-201ENST00000410167 303 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 RNU2-41P-201ENST00000410991 178 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 MTND3P8-201ENST00000412909 339 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 NDUFB4P5-201ENST00000415445 361 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 HSPE1P1-201ENST00000421494 318 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
ZIC3O60481 NDUFA5P4-201ENST00000436704 385 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC006028.1-201ENST00000438379 402 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 NDUFB1P2-201ENST00000449477 176 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms