Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 AC107393.1-201ENST00000512403 346 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.98□□□□□ -2.09
CHMP2AO43633 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.98□□□□□ -2.09
CHMP2AO43633 AL355297.2-201ENST00000604792 129 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AC112220.3-201ENST00000605502 502 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AL136370.1-201ENST00000608166 691 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP2AO43633 AC091834.1-201ENST00000614543 472 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.98□□□□□ -2.09
CHMP2AO43633 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CHMP2AO43633 U4atac.1-201ENST00000618345 95 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 AL607023.1-201ENST00000620045 248 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 Z75746.1-201ENST00000440243 2080 ntBASIC1.98□□□□□ -2.09
CHMP2AO43633 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AC106754.1-201ENST00000562632 1513 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 OR56A5-201ENST00000340110 738 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 RNU6-723P-201ENST00000383973 107 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 RNU6-925P-201ENST00000384629 104 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP2AO43633 RPL7P12-201ENST00000446719 750 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 AC092001.1-201ENST00000453012 261 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 USP9YP10-201ENST00000454868 628 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP2AO43633 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AC022662.1-201ENST00000580252 331 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHMP2AO43633 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CHMP2AO43633 AC011939.3-201ENST00000613686 466 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 SDR42E1P4-201ENST00000620894 481 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP2AO43633 PCMTD1P7-201ENST00000634506 357 ntBASIC1.97□□□□□ -2.09
CHMP2AO43633 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHMP2AO43633 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CHMP2AO43633 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 UBE2L2-201ENST00000254302 429 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 RNU2-63P-201ENST00000410792 194 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP2AO43633 ZNF90P2-204ENST00000419323 1075 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC083875.1-201ENST00000419509 405 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP2AO43633 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP2AO43633 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP2AO43633 FABP5P15-201ENST00000453566 214 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP2AO43633 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP2AO43633 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC011005.2-201ENST00000487324 359 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC055855.1-201ENST00000489563 579 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC026801.1-201ENST00000497178 464 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 CKS1BP2-201ENST00000497342 240 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC119751.4-201ENST00000507498 357 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CHMP2AO43633 RNU6-64P-201ENST00000517119 105 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP2AO43633 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP2AO43633 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP2AO43633 MIR4293-201ENST00000584305 78 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.96□□□□□ -2.1
CHMP2AO43633 BNIP3P23-201ENST00000599655 511 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC004987.4-201ENST00000603383 338 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AC013244.3-201ENST00000605614 388 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 AL355472.4-201ENST00000610233 626 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.96□□□□□ -2.1
CHMP2AO43633 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHMP2AO43633 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CHMP2AO43633 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHMP2AO43633 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHMP2AO43633 NACAP2-201ENST00000318548 624 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 RNU1-72P-201ENST00000362976 153 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 RNU6-157P-201ENST00000383957 107 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 RNU6-769P-201ENST00000384407 104 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 MIR513B-201ENST00000385136 84 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 AC078974.1-201ENST00000411597 223 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 VPS26BP1-201ENST00000417155 755 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.95□□□□□ -2.1
CHMP2AO43633 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
CHMP2AO43633 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.95□□□□□ -2.1
CHMP2AO43633 HSFY7P-201ENST00000432672 318 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms