Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL049641.1-201ENST00000441055 1948 ntBASIC3.59□□□□□ -1.83
PROM1O43490 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PROM1O43490 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PROM1O43490 AC007256.1-201ENST00000392253 2765 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.84
PROM1O43490 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.59□□□□□ -1.84
PROM1O43490 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.59□□□□□ -1.84
PROM1O43490 ZNF285B-201ENST00000561698 1767 ntBASIC3.58□□□□□ -1.84
PROM1O43490 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 TNPO1P3-201ENST00000436471 2662 ntBASIC3.58□□□□□ -1.84
PROM1O43490 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 AF117829.1-206ENST00000621883 3802 ntBASIC3.58□□□□□ -1.84
PROM1O43490 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.58□□□□□ -1.84
PROM1O43490 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
PROM1O43490 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 Y_RNA.145-201ENST00000363527 102 ntBASIC3.58□□□□□ -1.84
PROM1O43490 RNU6-266P-201ENST00000364225 107 ntBASIC3.58□□□□□ -1.84
PROM1O43490 RNU6-593P-201ENST00000364716 112 ntBASIC3.58□□□□□ -1.84
PROM1O43490 Y_RNA.473-201ENST00000384333 102 ntBASIC3.58□□□□□ -1.84
PROM1O43490 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.58□□□□□ -1.84
PROM1O43490 PMCHL1-202ENST00000423102 261 ntBASIC3.58□□□□□ -1.84
PROM1O43490 RPL7P37-201ENST00000425095 738 ntBASIC3.58□□□□□ -1.84
PROM1O43490 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PROM1O43490 TXNP1-201ENST00000441872 371 ntBASIC3.58□□□□□ -1.84
PROM1O43490 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.58□□□□□ -1.84
PROM1O43490 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.58□□□□□ -1.84
PROM1O43490 AC026801.1-201ENST00000497178 464 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 AC009901.1-201ENST00000506703 541 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC087854.1-201ENST00000519706 414 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.58□□□□□ -1.84
PROM1O43490 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.58□□□□□ -1.84
PROM1O43490 BRDTP1-201ENST00000605735 677 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC084757.4-201ENST00000616350 526 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.58□□□□□ -1.84
PROM1O43490 AL512643.1-201ENST00000635735 524 ntBASIC3.58□□□□□ -1.84
PROM1O43490 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PROM1O43490 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PROM1O43490 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 UBE2L2-201ENST00000254302 429 ntBASIC3.57□□□□□ -1.84
PROM1O43490 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 AC138393.1-203ENST00000327086 343 ntBASIC3.57□□□□□ -1.84
PROM1O43490 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 SNORA9-201ENST00000384215 133 ntBASIC3.57□□□□□ -1.84
PROM1O43490 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 AL513331.1-201ENST00000411908 397 ntBASIC3.57□□□□□ -1.84
PROM1O43490 YPEL5P1-201ENST00000419731 367 ntBASIC3.57□□□□□ -1.84
PROM1O43490 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
PROM1O43490 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 AL592045.1-201ENST00000429867 352 ntBASIC3.57□□□□□ -1.84
PROM1O43490 ARF4P2-201ENST00000430209 526 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.57□□□□□ -1.84
PROM1O43490 AL359672.1-201ENST00000442302 409 ntBASIC3.57□□□□□ -1.84
PROM1O43490 NOTCH2P1-201ENST00000443481 624 ntBASIC3.57□□□□□ -1.84
PROM1O43490 RPS3AP12-201ENST00000443616 753 ntBASIC3.57□□□□□ -1.84
PROM1O43490 RPS23P3-201ENST00000470993 430 ntBASIC3.57□□□□□ -1.84
PROM1O43490 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 RNA5SP208-201ENST00000516156 78 ntBASIC3.57□□□□□ -1.84
PROM1O43490 Y_RNA.708-201ENST00000516950 96 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AC022634.1-201ENST00000520765 532 ntBASIC3.57□□□□□ -1.84
PROM1O43490 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
PROM1O43490 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.57□□□□□ -1.84
PROM1O43490 SRGNP1-201ENST00000603392 451 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AC005183.1-201ENST00000603687 1979 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AC007179.3-201ENST00000604976 235 ntBASIC3.57□□□□□ -1.84
PROM1O43490 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PROM1O43490 AC009229.3-201ENST00000608056 282 ntBASIC3.57□□□□□ -1.84
PROM1O43490 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AC012314.7-201ENST00000619693 93 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AC092608.2-201ENST00000624427 218 ntBASIC3.57□□□□□ -1.84
PROM1O43490 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.57□□□□□ -1.84
PROM1O43490 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
PROM1O43490 AC090740.1-201ENST00000623193 2262 ntBASIC3.56□□□□□ -1.84
PROM1O43490 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.56□□□□□ -1.84
PROM1O43490 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PROM1O43490 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PROM1O43490 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PROM1O43490 Y_RNA.28-201ENST00000362554 111 ntBASIC3.56□□□□□ -1.84
PROM1O43490 RNU6-371P-201ENST00000364283 108 ntBASIC3.56□□□□□ -1.84
PROM1O43490 RNU6-512P-201ENST00000364438 103 ntBASIC3.56□□□□□ -1.84
PROM1O43490 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 SNORA75B-201ENST00000384053 137 ntBASIC3.56□□□□□ -1.84
PROM1O43490 RNU6-306P-201ENST00000384617 107 ntBASIC3.56□□□□□ -1.84
PROM1O43490 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PROM1O43490 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 AC063979.1-201ENST00000415539 377 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms