Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TO15178 AC006020.1-201ENST00000420179 1854 ntBASIC2.84□□□□□ -1.96
TO15178 AC027514.1-201ENST00000588561 1603 ntBASIC2.83□□□□□ -1.96
TO15178 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.83□□□□□ -1.96
TO15178 RNA5SP374-201ENST00000362939 125 ntBASIC2.83□□□□□ -1.96
TO15178 Y_RNA.255-201ENST00000364581 97 ntBASIC2.83□□□□□ -1.96
TO15178 Y_RNA.372-201ENST00000365599 102 ntBASIC2.83□□□□□ -1.96
TO15178 Y_RNA.381-201ENST00000365666 102 ntBASIC2.83□□□□□ -1.96
TO15178 AL139039.1-201ENST00000401900 692 ntBASIC2.83□□□□□ -1.96
TO15178 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
TO15178 RNU2-25P-201ENST00000411041 191 ntBASIC2.83□□□□□ -1.96
TO15178 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.83□□□□□ -1.96
TO15178 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.83□□□□□ -1.96
TO15178 AL353729.1-201ENST00000425044 720 ntBASIC2.83□□□□□ -1.96
TO15178 SKA2P1-201ENST00000425592 390 ntBASIC2.83□□□□□ -1.96
TO15178 AC098614.2-201ENST00000426040 255 ntBASIC2.83□□□□□ -1.96
TO15178 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AC009414.1-201ENST00000427200 443 ntBASIC2.83□□□□□ -1.96
TO15178 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
TO15178 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.83□□□□□ -1.96
TO15178 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AC016691.1-201ENST00000441321 413 ntBASIC2.83□□□□□ -1.96
TO15178 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AL118520.1-201ENST00000450770 291 ntBASIC2.83□□□□□ -1.96
TO15178 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 RPL21P41-201ENST00000459863 264 ntBASIC2.83□□□□□ -1.96
TO15178 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AC009902.1-201ENST00000519351 183 ntBASIC2.83□□□□□ -1.96
TO15178 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.83□□□□□ -1.96
TO15178 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AP005435.4-201ENST00000529514 284 ntBASIC2.83□□□□□ -1.96
TO15178 H3F3AP1-201ENST00000559984 334 ntBASIC2.83□□□□□ -1.96
TO15178 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.83□□□□□ -1.96
TO15178 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.83□□□□□ -1.96
TO15178 AC103810.1-201ENST00000579873 453 ntBASIC2.83□□□□□ -1.96
TO15178 HMGN2P15-201ENST00000585707 270 ntBASIC2.83□□□□□ -1.96
TO15178 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.83□□□□□ -1.96
TO15178 BNIP3P22-201ENST00000593399 556 ntBASIC2.83□□□□□ -1.96
TO15178 DEFB131E-202ENST00000602581 683 ntBASIC2.83□□□□□ -1.96
TO15178 AC146944.4-201ENST00000602697 718 ntBASIC2.83□□□□□ -1.96
TO15178 RPL23AP88-201ENST00000605759 454 ntBASIC2.83□□□□□ -1.96
TO15178 AC069234.5-201ENST00000611056 416 ntBASIC2.83□□□□□ -1.96
TO15178 U6.42-201ENST00000618440 107 ntBASIC2.83□□□□□ -1.96
TO15178 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TO15178 U6.99-201ENST00000637524 83 ntBASIC2.83□□□□□ -1.96
TO15178 AC068137.3-201ENST00000639191 341 ntBASIC2.83□□□□□ -1.96
TO15178 AC073869.6-201ENST00000640656 341 ntBASIC2.83□□□□□ -1.96
TO15178 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TO15178 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TO15178 AL353743.1-202ENST00000431724 1695 ntBASIC2.82□□□□□ -1.96
TO15178 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
TO15178 HSPA8P4-201ENST00000511877 1920 ntBASIC2.82□□□□□ -1.96
TO15178 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
TO15178 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TO15178 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TO15178 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
TO15178 SNORA54-201ENST00000384281 123 ntBASIC2.82□□□□□ -1.96
TO15178 RNU6-658P-201ENST00000384606 106 ntBASIC2.82□□□□□ -1.96
TO15178 RNU6-903P-201ENST00000391270 109 ntBASIC2.82□□□□□ -1.96
TO15178 FCF1P9-201ENST00000412546 282 ntBASIC2.82□□□□□ -1.96
TO15178 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.82□□□□□ -1.96
TO15178 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 MTCYBP8-201ENST00000422855 651 ntBASIC2.82□□□□□ -1.96
TO15178 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.82□□□□□ -1.96
TO15178 AC073415.1-201ENST00000449240 153 ntBASIC2.82□□□□□ -1.96
TO15178 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.82□□□□□ -1.96
TO15178 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 SNRPFP3-201ENST00000457792 225 ntBASIC2.82□□□□□ -1.96
TO15178 RPS29P20-201ENST00000489592 171 ntBASIC2.82□□□□□ -1.96
TO15178 RPS27AP10-201ENST00000496103 208 ntBASIC2.82□□□□□ -1.96
TO15178 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 AC104136.1-201ENST00000512969 394 ntBASIC2.82□□□□□ -1.96
TO15178 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 RN7SKP57-201ENST00000517248 293 ntBASIC2.82□□□□□ -1.96
TO15178 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.82□□□□□ -1.96
TO15178 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.82□□□□□ -1.96
TO15178 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.82□□□□□ -1.96
TO15178 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.82□□□□□ -1.96
TO15178 AC136619.2-201ENST00000563361 631 ntBASIC2.82□□□□□ -1.96
TO15178 AC005498.1-201ENST00000592125 465 ntBASIC2.82□□□□□ -1.96
TO15178 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.82□□□□□ -1.96
TO15178 AC007938.3-201ENST00000604965 623 ntBASIC2.82□□□□□ -1.96
TO15178 AC093788.1-201ENST00000609356 927 ntBASIC2.82□□□□□ -1.96
TO15178 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.82□□□□□ -1.96
TO15178 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TO15178 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TO15178 AC110491.1-201ENST00000562191 2010 ntBASIC2.81□□□□□ -1.96
TO15178 MIR22-201ENST00000362190 85 ntBASIC2.81□□□□□ -1.96
TO15178 Y_RNA.9-201ENST00000362354 101 ntBASIC2.81□□□□□ -1.96
TO15178 RNU6-552P-201ENST00000362869 119 ntBASIC2.81□□□□□ -1.96
TO15178 RNU6-371P-201ENST00000364283 108 ntBASIC2.81□□□□□ -1.96
TO15178 SNORA69-201ENST00000383895 132 ntBASIC2.81□□□□□ -1.96
TO15178 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
TO15178 SNORD67-201ENST00000390833 111 ntBASIC2.81□□□□□ -1.96
TO15178 EEF1A1P40-201ENST00000412883 573 ntBASIC2.81□□□□□ -1.96
TO15178 AL031779.1-201ENST00000415663 330 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms