Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL139397.2-201ENST00000404529 772 ntBASIC2.81□□□□□ -1.96
O00370 GSTA9P-201ENST00000406231 611 ntBASIC2.81□□□□□ -1.96
O00370 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 RNU4-55P-201ENST00000410731 137 ntBASIC2.81□□□□□ -1.96
O00370 RNU2-25P-201ENST00000411041 191 ntBASIC2.81□□□□□ -1.96
O00370 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
O00370 AC010975.2-201ENST00000427781 588 ntBASIC2.81□□□□□ -1.96
O00370 MTCO2P11-201ENST00000431069 680 ntBASIC2.81□□□□□ -1.96
O00370 GTF2IP20-201ENST00000431663 360 ntBASIC2.81□□□□□ -1.96
O00370 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 MTATP6P16-201ENST00000434543 526 ntBASIC2.81□□□□□ -1.96
O00370 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 HMGB3P12-201ENST00000438745 556 ntBASIC2.81□□□□□ -1.96
O00370 AC079781.2-201ENST00000446424 169 ntBASIC2.81□□□□□ -1.96
O00370 DPPA3P1-201ENST00000448050 469 ntBASIC2.81□□□□□ -1.96
O00370 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
O00370 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
O00370 AC006512.1-201ENST00000468816 291 ntBASIC2.81□□□□□ -1.96
O00370 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.81□□□□□ -1.96
O00370 AC079382.1-201ENST00000493346 557 ntBASIC2.81□□□□□ -1.96
O00370 AC116562.3-201ENST00000506136 177 ntBASIC2.81□□□□□ -1.96
O00370 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.81□□□□□ -1.96
O00370 MTCYBP20-201ENST00000524239 1129 ntBASIC2.81□□□□□ -1.96
O00370 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
O00370 AC068587.5-201ENST00000528506 175 ntBASIC2.81□□□□□ -1.96
O00370 OR4R1P-201ENST00000529879 463 ntBASIC2.81□□□□□ -1.96
O00370 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.81□□□□□ -1.96
O00370 AC022880.1-201ENST00000534017 973 ntBASIC2.81□□□□□ -1.96
O00370 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.81□□□□□ -1.96
O00370 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 MTND4LP5-201ENST00000605152 292 ntBASIC2.81□□□□□ -1.96
O00370 AC022893.3-201ENST00000607665 437 ntBASIC2.81□□□□□ -1.96
O00370 AC107294.1-201ENST00000609524 467 ntBASIC2.81□□□□□ -1.96
O00370 AC034102.8-201ENST00000615146 484 ntBASIC2.81□□□□□ -1.96
O00370 AL158209.2-201ENST00000619266 216 ntBASIC2.81□□□□□ -1.96
O00370 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.81□□□□□ -1.96
O00370 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.81□□□□□ -1.96
O00370 AC022336.2-201ENST00000568966 2538 ntBASIC2.81□□□□□ -1.96
O00370 MTND5P26-201ENST00000426018 1752 ntBASIC2.8□□□□□ -1.96
O00370 MIR6073-201ENST00000352083 89 ntBASIC2.8□□□□□ -1.96
O00370 FTLP6-201ENST00000355274 422 ntBASIC2.8□□□□□ -1.96
O00370 RNU6-960P-201ENST00000364056 120 ntBASIC2.8□□□□□ -1.96
O00370 Y_RNA.381-201ENST00000365666 102 ntBASIC2.8□□□□□ -1.96
O00370 RNU6-14P-201ENST00000384630 106 ntBASIC2.8□□□□□ -1.96
O00370 SNORD116-4-201ENST00000384733 96 ntBASIC2.8□□□□□ -1.96
O00370 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.8□□□□□ -1.96
O00370 RNU2-52P-201ENST00000410680 190 ntBASIC2.8□□□□□ -1.96
O00370 RNA5SP111-201ENST00000411386 101 ntBASIC2.8□□□□□ -1.96
O00370 RPS12P24-201ENST00000412619 387 ntBASIC2.8□□□□□ -1.96
O00370 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.8□□□□□ -1.96
O00370 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
O00370 ZNF90P2-204ENST00000419323 1075 ntBASIC2.8□□□□□ -1.96
O00370 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
O00370 MTCO3P5-201ENST00000433620 714 ntBASIC2.8□□□□□ -1.96
O00370 AC002486.1-201ENST00000435098 391 ntBASIC2.8□□□□□ -1.96
O00370 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
O00370 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.8□□□□□ -1.96
O00370 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.8□□□□□ -1.96
O00370 RPS29P15-201ENST00000458329 171 ntBASIC2.8□□□□□ -1.96
O00370 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.8□□□□□ -1.96
O00370 RNU6-123P-201ENST00000516163 102 ntBASIC2.8□□□□□ -1.96
O00370 RNU6-143P-201ENST00000516942 93 ntBASIC2.8□□□□□ -1.96
O00370 RNA5SP165-201ENST00000517142 115 ntBASIC2.8□□□□□ -1.96
O00370 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.8□□□□□ -1.96
O00370 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
O00370 GLYCAM1-201ENST00000546596 285 ntBASIC2.8□□□□□ -1.96
O00370 RPS3AP4-201ENST00000555161 764 ntBASIC2.8□□□□□ -1.96
O00370 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.8□□□□□ -1.96
O00370 MIR4319-201ENST00000577285 85 ntBASIC2.8□□□□□ -1.96
O00370 AC090616.3-201ENST00000582184 217 ntBASIC2.8□□□□□ -1.96
O00370 MIR4298-201ENST00000584380 73 ntBASIC2.8□□□□□ -1.96
O00370 HMGN2P15-201ENST00000585707 270 ntBASIC2.8□□□□□ -1.96
O00370 AL670379.4-201ENST00000605279 254 ntBASIC2.8□□□□□ -1.96
O00370 AC004805.2-201ENST00000605382 482 ntBASIC2.8□□□□□ -1.96
O00370 AC015540.1-201ENST00000615828 501 ntBASIC2.8□□□□□ -1.96
O00370 AC025034.2-201ENST00000623264 286 ntBASIC2.8□□□□□ -1.96
O00370 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.8□□□□□ -1.96
O00370 U6.114-201ENST00000636407 96 ntBASIC2.8□□□□□ -1.96
O00370 Z99571.1-201ENST00000636677 394 ntBASIC2.8□□□□□ -1.96
O00370 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
O00370 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
O00370 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.8□□□□□ -1.96
O00370 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.79□□□□□ -1.96
O00370 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
O00370 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
O00370 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
O00370 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
O00370 RNU6-817P-201ENST00000391083 104 ntBASIC2.79□□□□□ -1.96
O00370 CISD1P1-201ENST00000393907 327 ntBASIC2.79□□□□□ -1.96
O00370 AC068050.1-201ENST00000394891 380 ntBASIC2.79□□□□□ -1.96
O00370 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.79□□□□□ -1.96
O00370 AC092047.1-201ENST00000424997 240 ntBASIC2.79□□□□□ -1.96
O00370 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.79□□□□□ -1.96
O00370 ISCA1P1-201ENST00000426679 387 ntBASIC2.79□□□□□ -1.96
O00370 AC063976.3-201ENST00000426849 329 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms