Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM1O00151 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.4□□□□□ -2.03
PDLIM1O00151 MIR3167-201ENST00000579623 85 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 SNORD53-201ENST00000579969 78 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 FARSBP1-201ENST00000435808 1778 ntBASIC2.4□□□□□ -2.03
PDLIM1O00151 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM1O00151 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM1O00151 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 Y_RNA.201-201ENST00000364052 96 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 SNORA4.3-201ENST00000365564 137 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 RNU6-297P-201ENST00000384636 107 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 MIR558-201ENST00000384920 94 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 MIR634-201ENST00000385208 97 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 U3.40-201ENST00000408706 208 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC098831.1-201ENST00000440661 216 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 AL022238.1-201ENST00000442557 355 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 MTND1P27-201ENST00000451117 902 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC117522.1-201ENST00000509821 380 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 Y_RNA.688-201ENST00000516565 95 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 Y_RNA.695-201ENST00000516715 107 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 SNORA18.6-201ENST00000516792 115 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 RNU6-1220P-201ENST00000517126 108 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 AC109329.2-201ENST00000519658 482 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 OR5B19P-201ENST00000531766 928 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC078814.3-201ENST00000553036 491 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.39□□□□□ -2.03
PDLIM1O00151 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM1O00151 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AL158063.1-201ENST00000615349 536 ntBASIC2.39□□□□□ -2.03
PDLIM1O00151 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
PDLIM1O00151 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PDLIM1O00151 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PDLIM1O00151 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.39□□□□□ -2.03
PDLIM1O00151 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM1O00151 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM1O00151 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM1O00151 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM1O00151 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM1O00151 AC062016.1-201ENST00000355719 319 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 RNU6-750P-201ENST00000390946 107 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AL162578.1-201ENST00000406202 378 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AL513475.1-201ENST00000406602 315 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM1O00151 BX295541.1-201ENST00000417774 250 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 MED13P1-201ENST00000428342 171 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM1O00151 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.38□□□□□ -2.03
PDLIM1O00151 MTND2P4-201ENST00000445034 1004 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.38□□□□□ -2.03
PDLIM1O00151 AP000936.2-201ENST00000447151 681 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 MTATP6P7-201ENST00000453315 681 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 RPL23AP49-201ENST00000492925 468 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM1O00151 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM1O00151 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM1O00151 RNU6-703P-201ENST00000516946 107 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 ADI1P3-201ENST00000549509 470 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM1O00151 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM1O00151 MIR4319-201ENST00000577285 85 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 NRBF2P1-201ENST00000587407 859 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC040904.1-201ENST00000590850 223 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 RPS15AP11-201ENST00000594193 385 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AC090578.1-201ENST00000604955 591 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 MIR98-201ENST00000606724 119 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 MIR15A-201ENST00000607334 83 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 AL449363.1-201ENST00000617815 186 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 Z69908.1-201ENST00000622603 247 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM1O00151 TEX21P-201ENST00000447107 1476 ntBASIC2.38□□□□□ -2.03
PDLIM1O00151 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM1O00151 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM1O00151 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PDLIM1O00151 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDLIM1O00151 SNORA5B-201ENST00000363786 132 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 SNORA38-201ENST00000363946 132 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 RN7SKP226-201ENST00000364912 300 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 RNU6-169P-201ENST00000365336 107 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 Y_RNA.534-201ENST00000384599 112 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms