Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-72P-201ENST00000384285 79 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 HMGN2P39-201ENST00000398005 273 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL591034.2-201ENST00000402839 359 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC008267.5-201ENST00000424928 265 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL606517.1-201ENST00000446914 387 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL031659.1-201ENST00000447075 539 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC104978.1-201ENST00000449387 391 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 RPS3P1-201ENST00000456781 192 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC018868.1-201ENST00000491307 315 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC114781.4-201ENST00000513707 639 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC096725.1-201ENST00000514266 313 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC034114.1-201ENST00000520293 285 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AP004607.1-201ENST00000524456 203 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 ADI1P3-201ENST00000549509 470 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 SNORD53-201ENST00000579969 78 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL031274.2-201ENST00000599419 203 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 BNIP3P30-201ENST00000601184 574 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL138889.2-201ENST00000603883 242 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC021646.1-201ENST00000605469 484 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AL121917.1-203ENST00000605534 577 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC067747.1-201ENST00000608026 250 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC093788.1-201ENST00000609356 927 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC006133.1-201ENST00000617106 264 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 U6.42-201ENST00000618440 107 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 AC009878.1-201ENST00000621819 340 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 Y_RNA.126-201ENST00000363382 111 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 RNU6-487P-201ENST00000365430 104 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 MIR9-1-201ENST00000385198 89 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 SNORA46.1-201ENST00000391069 153 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AL445529.1-201ENST00000398713 389 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 RPS3AP25-201ENST00000411660 793 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC114491.1-201ENST00000416095 246 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 snoU109.2-201ENST00000459316 135 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 HMGB1P30-201ENST00000492455 606 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AL358832.1-201ENST00000497800 389 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC112206.3-201ENST00000514578 389 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 MIR3200-201ENST00000580767 85 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 MIR548AC-201ENST00000585049 88 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC098614.4-201ENST00000607601 462 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC027449.1-201ENST00000608890 407 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC138749.5-201ENST00000611461 208 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC012409.4-201ENST00000612923 249 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 MIR7844-201ENST00000616161 122 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 AC116165.2-201ENST00000616705 206 ntBASIC1.7□□□□□ -2.14
SMKR1H3BMG3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMKR1H3BMG3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU5E-1-201ENST00000362477 120 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 SNORD3E-201ENST00000362899 217 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU1-23P-201ENST00000363361 144 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU6-39P-201ENST00000384344 107 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 MIR34A-201ENST00000385130 110 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 MTCYBP36-201ENST00000404146 440 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AL589872.1-201ENST00000426602 288 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 YME1L1P1-201ENST00000429435 297 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RPS15AP28-201ENST00000435088 386 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 FAM133DP-201ENST00000464802 691 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AC104435.1-201ENST00000483483 166 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms