Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNA5SP62-201ENST00000363457 110 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU6-716P-201ENST00000365621 103 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU6-278P-201ENST00000390945 109 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU6-193P-201ENST00000410977 107 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 USP9YP13-201ENST00000417797 480 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 HMGB1P49-201ENST00000418882 569 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL593851.1-201ENST00000426171 157 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RAC1P7-201ENST00000445367 377 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RPL31P41-201ENST00000477967 372 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 ARL2BPP4-201ENST00000506854 471 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 OR5BM1P-201ENST00000512021 366 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC110760.3-202ENST00000515177 371 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU5F-8P-201ENST00000515941 111 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 OR6C7P-201ENST00000547875 934 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 ANP32BP3-201ENST00000559213 706 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC106791.2-201ENST00000604680 391 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL357080.1-201ENST00000617394 239 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 DUXAP9-208ENST00000622815 614 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC040168.1-201ENST00000623594 991 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC022513.1-201ENST00000624512 117 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 MTND2P41-201ENST00000637599 773 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 CCT4P2-201ENST00000233836 1548 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AL022578.1-201ENST00000439330 1433 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 RNU6-223P-201ENST00000362830 107 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 RPS15AP38-201ENST00000413110 372 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 RPL21P24-201ENST00000413752 448 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 USP9YP11-201ENST00000427537 717 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AL591212.2-201ENST00000433923 257 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 DPPA3P1-201ENST00000448050 469 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC116353.3-201ENST00000511215 249 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC010587.2-201ENST00000511727 448 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1225P-201ENST00000516336 65 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 RNU6-798P-201ENST00000516912 103 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC002545.1-201ENST00000592511 181 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC131235.4-201ENST00000609288 620 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AL161629.2-201ENST00000615347 275 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC010133.1-201ENST00000615809 842 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC140725.3-201ENST00000616193 880 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AL390862.1-201ENST00000635467 1469 ntBASIC1.09□□□□□ -2.23
COL6A6A6NMZ7 AC009812.4-201ENST00000569134 1805 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU6-374P-201ENST00000364146 108 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU6-853P-201ENST00000364306 107 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU6-723P-201ENST00000383973 107 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU6-114P-201ENST00000384704 105 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 CCNG1P1-201ENST00000406783 885 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 RNU2-62P-201ENST00000410868 191 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AL451054.2-201ENST00000420896 202 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 SETP11-201ENST00000473027 690 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 HSPE1P4-201ENST00000550617 308 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 MTND1P8-201ENST00000571424 950 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC136618.2-201ENST00000575091 400 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC090615.1-201ENST00000577519 154 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AL353997.4-201ENST00000586196 166 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC008739.2-201ENST00000597006 317 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC105129.3-201ENST00000605455 485 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC034229.4-201ENST00000607861 441 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC004908.2-201ENST00000609090 574 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC013470.4-201ENST00000619978 986 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms