Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AC011445.2-201ENST00000599274 173 ntBASIC3.87□□□□□ -1.79
U3KQE9 AL356575.1-201ENST00000603008 283 ntBASIC3.87□□□□□ -1.79
U3KQE9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.87□□□□□ -1.79
U3KQE9 MIR6134-201ENST00000617606 109 ntBASIC3.87□□□□□ -1.79
U3KQE9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
U3KQE9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
U3KQE9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
U3KQE9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 AC104260.2-201ENST00000623551 3497 ntBASIC3.86□□□□□ -1.79
U3KQE9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 RNU4-80P-201ENST00000363200 141 ntBASIC3.86□□□□□ -1.79
U3KQE9 Y_RNA.412-201ENST00000384001 104 ntBASIC3.86□□□□□ -1.79
U3KQE9 RNU6-245P-201ENST00000384020 107 ntBASIC3.86□□□□□ -1.79
U3KQE9 SNORD116-20-201ENST00000384529 92 ntBASIC3.86□□□□□ -1.79
U3KQE9 RNU6-376P-201ENST00000384731 106 ntBASIC3.86□□□□□ -1.79
U3KQE9 RNU6-239P-201ENST00000390990 99 ntBASIC3.86□□□□□ -1.79
U3KQE9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 AC074117.2-201ENST00000417130 397 ntBASIC3.86□□□□□ -1.79
U3KQE9 BX323845.1-201ENST00000432417 179 ntBASIC3.86□□□□□ -1.79
U3KQE9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.86□□□□□ -1.79
U3KQE9 RPS29P9-201ENST00000440360 171 ntBASIC3.86□□□□□ -1.79
U3KQE9 AL391987.1-201ENST00000441025 200 ntBASIC3.86□□□□□ -1.79
U3KQE9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.86□□□□□ -1.79
U3KQE9 AL451050.1-201ENST00000450126 415 ntBASIC3.86□□□□□ -1.79
U3KQE9 RNU6-625P-201ENST00000459412 107 ntBASIC3.86□□□□□ -1.79
U3KQE9 RPS17P2-201ENST00000461663 408 ntBASIC3.86□□□□□ -1.79
U3KQE9 RPS4XP22-201ENST00000480755 780 ntBASIC3.86□□□□□ -1.79
U3KQE9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.86□□□□□ -1.79
U3KQE9 AC020890.1-201ENST00000491837 504 ntBASIC3.86□□□□□ -1.79
U3KQE9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 HMGB3P3-201ENST00000510526 400 ntBASIC3.86□□□□□ -1.79
U3KQE9 CKS1BP7-201ENST00000522230 235 ntBASIC3.86□□□□□ -1.79
U3KQE9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
U3KQE9 HSPE1P4-201ENST00000550617 308 ntBASIC3.86□□□□□ -1.79
U3KQE9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.86□□□□□ -1.79
U3KQE9 AC084757.4-201ENST00000616350 526 ntBASIC3.86□□□□□ -1.79
U3KQE9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.86□□□□□ -1.79
U3KQE9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.86□□□□□ -1.79
U3KQE9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.86□□□□□ -1.79
U3KQE9 NOL8P1-201ENST00000508336 3529 ntBASIC3.86□□□□□ -1.79
U3KQE9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.85□□□□□ -1.79
U3KQE9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
U3KQE9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 RNU6-873P-201ENST00000363833 107 ntBASIC3.85□□□□□ -1.79
U3KQE9 RN7SKP224-201ENST00000364140 325 ntBASIC3.85□□□□□ -1.79
U3KQE9 RNA5SP515-201ENST00000364570 118 ntBASIC3.85□□□□□ -1.79
U3KQE9 RNU6-275P-201ENST00000364910 107 ntBASIC3.85□□□□□ -1.79
U3KQE9 RNU6-215P-201ENST00000365169 102 ntBASIC3.85□□□□□ -1.79
U3KQE9 SNORA40-201ENST00000388090 126 ntBASIC3.85□□□□□ -1.79
U3KQE9 MIR1286-201ENST00000408112 78 ntBASIC3.85□□□□□ -1.79
U3KQE9 SNORA77-201ENST00000408716 125 ntBASIC3.85□□□□□ -1.79
U3KQE9 RN7SKP206-201ENST00000410823 293 ntBASIC3.85□□□□□ -1.79
U3KQE9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.85□□□□□ -1.79
U3KQE9 EBAG9P1-201ENST00000418955 543 ntBASIC3.85□□□□□ -1.79
U3KQE9 HMGN2P30-201ENST00000423237 256 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC009237.7-201ENST00000447357 229 ntBASIC3.85□□□□□ -1.79
U3KQE9 AL389915.2-201ENST00000454576 441 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC097484.1-201ENST00000471148 389 ntBASIC3.85□□□□□ -1.79
U3KQE9 AL121594.1-201ENST00000475906 575 ntBASIC3.85□□□□□ -1.79
U3KQE9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.85□□□□□ -1.79
U3KQE9 RPL30P5-201ENST00000494923 336 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC023424.1-201ENST00000496058 459 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.85□□□□□ -1.79
U3KQE9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.85□□□□□ -1.79
U3KQE9 ATP5LP3-201ENST00000514223 304 ntBASIC3.85□□□□□ -1.79
U3KQE9 SNORD116-25-201ENST00000516517 92 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC018448.1-201ENST00000552843 316 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC009127.3-201ENST00000570531 403 ntBASIC3.85□□□□□ -1.79
U3KQE9 MIR548X2-201ENST00000579776 100 ntBASIC3.85□□□□□ -1.79
U3KQE9 MIR3176-201ENST00000582210 90 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC011447.4-201ENST00000587562 111 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.85□□□□□ -1.79
U3KQE9 FTX_3.1-201ENST00000610451 147 ntBASIC3.85□□□□□ -1.79
U3KQE9 AC023043.4-201ENST00000612081 449 ntBASIC3.85□□□□□ -1.79
U3KQE9 MIR6715B-201ENST00000637172 77 ntBASIC3.85□□□□□ -1.79
U3KQE9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
U3KQE9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms