Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MIR378J-201ENST00000611988 109 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC087385.3-201ENST00000620477 187 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD115-8-201ENST00000363856 82 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD115-38-201ENST00000365037 82 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-213P-201ENST00000384051 104 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-140P-201ENST00000384566 108 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 Y_RNA.580-201ENST00000391004 95 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 U3.32-201ENST00000408116 212 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 BX323845.1-201ENST00000432417 179 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 RN7SL319P-201ENST00000480656 221 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 MIR5692C2-201ENST00000577959 77 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 PCAT14-202ENST00000627127 3935 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AC063976.2-201ENST00000425667 3556 ntBASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB11Q9Y5F2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 MARK2P15-201ENST00000432204 2186 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 Y_RNA.81-201ENST00000362997 102 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-22P-201ENST00000384355 107 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-658P-201ENST00000384606 106 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 MIR487A-201ENST00000385009 80 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RNU5E-9P-201ENST00000411164 104 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 ELOCP19-201ENST00000411919 318 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 TBCAP2-201ENST00000416175 326 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RPL35AP21-201ENST00000437667 333 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RPL7AP61-201ENST00000443410 636 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 AC009237.7-201ENST00000447357 229 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 TPT1P12-201ENST00000448968 492 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD108-201ENST00000459332 71 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 AC008897.1-201ENST00000494006 347 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-479P-201ENST00000516348 105 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 AC090281.1-201ENST00000523019 276 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 MIR4737-201ENST00000583979 81 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 U2.21-201ENST00000637295 81 ntBASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHB11Q9Y5F2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 Y_RNA.272-201ENST00000364696 102 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 RNA5SP428-201ENST00000365129 132 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD116-20-201ENST00000384529 92 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 U3.19-201ENST00000390893 196 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AL358075.3-201ENST00000426289 226 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 RPL34P20-201ENST00000442771 351 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC005042.3-201ENST00000453230 174 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 RN7SL346P-201ENST00000491561 294 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC023424.1-201ENST00000496058 459 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC097462.2-201ENST00000504623 481 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 RNU1-103P-201ENST00000516502 125 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 MIR3667-201ENST00000581025 74 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC020895.1-201ENST00000595362 272 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AC022441.3-201ENST00000605737 136 ntBASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 AL591926.8-201ENST00000616876 211 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms