Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSX2IPQ9Y2D8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU4-79P-201ENST00000362764 141 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-288P-201ENST00000363690 104 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 SNORD113-7-201ENST00000363762 77 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-393P-201ENST00000384475 107 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 EIF4E2P1-201ENST00000393781 255 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 CISD1P1-201ENST00000393907 327 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RPS12P24-201ENST00000412619 387 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RPL7P10-201ENST00000417407 739 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 VDAC1P3-201ENST00000434069 851 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 HMGB1P12-201ENST00000438594 598 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 SNORA59A-201ENST00000459326 152 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 TRBVA-201ENST00000498804 316 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 MTCO3P9-201ENST00000506989 781 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-189P-201ENST00000516120 101 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-927P-201ENST00000516199 100 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-864P-201ENST00000516256 108 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AP000763.2-201ENST00000540641 163 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 TGIF1P1-201ENST00000558095 802 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC011471.1-201ENST00000585766 187 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 BNIP3P25-201ENST00000596023 559 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC092747.3-201ENST00000603769 301 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC022893.3-201ENST00000607665 437 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 Z82243.1-201ENST00000609432 473 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AL355810.1-201ENST00000614629 552 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AC090574.1-201ENST00000623186 233 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 MIR1302-1-201ENST00000637932 143 ntBASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX2IPQ9Y2D8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.399-201ENST00000383955 105 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-434P-201ENST00000384376 107 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 SNORD70.1-201ENST00000391007 85 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-55P-201ENST00000411092 107 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-954P-201ENST00000411355 107 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RNU2-71P-201ENST00000411395 189 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 NDUFA5P4-201ENST00000436704 385 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 HMGN2P20-201ENST00000437531 273 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC087588.1-201ENST00000462203 316 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RPS4XP13-201ENST00000483219 789 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC092185.1-201ENST00000491371 97 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 MTCO1P29-201ENST00000496868 288 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 HIGD1AP13-201ENST00000509878 289 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL359273.1-201ENST00000510918 627 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-277P-201ENST00000516272 106 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 TRAV37-201ENST00000553906 342 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL163153.1-201ENST00000554223 283 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 MED28P6-201ENST00000558776 231 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AL355375.2-201ENST00000574825 175 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 MIR5680-201ENST00000577577 84 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC012493.2-201ENST00000595083 291 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC034102.8-201ENST00000615146 484 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC103705.1-201ENST00000619013 241 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AP003400.5-201ENST00000624827 617 ntBASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX2IPQ9Y2D8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RNU1-75P-201ENST00000347264 129 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms