Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC027807.2-201ENST00000616099 408 ntBASIC2.49□□□□□ -2.01
SMC3Q9UQE7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SMC3Q9UQE7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 RNU6-500P-201ENST00000362349 107 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 Y_RNA.46-201ENST00000362695 102 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 SNORA46.1-201ENST00000391069 153 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AL021407.1-201ENST00000404531 386 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AL109913.1-201ENST00000421173 514 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 MTATP6P17-201ENST00000431030 672 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AL365184.2-201ENST00000431139 435 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 TIMM9P1-201ENST00000436122 256 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 CECR9-201ENST00000453421 199 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC005178.1-201ENST00000508392 440 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 RNU1-40P-201ENST00000516816 164 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 RNU1-97P-201ENST00000516872 164 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 SCARNA3-201ENST00000517097 143 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 RNU6-1003P-201ENST00000517099 105 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AP003122.3-201ENST00000526316 255 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AP003181.2-201ENST00000528941 181 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AL356432.3-201ENST00000568952 465 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC002400.1-201ENST00000569310 726 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 KC877982.1-201ENST00000602313 470 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AP001981.2-201ENST00000603241 418 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AL031775.1-201ENST00000607014 887 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC008147.4-201ENST00000617570 1204 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AC079416.3-201ENST00000624479 549 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 AP000553.5-201ENST00000641933 54 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMC3Q9UQE7 MTND5P6-201ENST00000422338 1798 ntBASIC2.48□□□□□ -2.01
SMC3Q9UQE7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL139397.2-201ENST00000404529 772 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 CYCSP48-201ENST00000417124 323 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RPS27AP14-201ENST00000422868 454 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 HMGB1P27-201ENST00000431429 603 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RPL37P21-201ENST00000435890 276 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC118469.1-201ENST00000442943 488 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RPS27AP8-201ENST00000452665 445 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MTND3P7-201ENST00000474435 343 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC026801.1-201ENST00000497178 464 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 RPF2P2-201ENST00000504693 896 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 SNORD19.2-201ENST00000516978 73 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 OR5AQ1P-201ENST00000527596 927 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AP000889.1-201ENST00000530968 660 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MIR5697-201ENST00000578045 78 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MIR4513-201ENST00000581077 86 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MIR3199-1-201ENST00000582434 88 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC090616.2-202ENST00000584248 222 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 MIR4448-201ENST00000584360 86 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC098826.3-201ENST00000603823 466 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AL022161.1-201ENST00000604390 213 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AP000860.1-201ENST00000605250 559 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.47□□□□□ -2.01
SMC3Q9UQE7 AC079248.2-201ENST00000623779 326 ntBASIC2.47□□□□□ -2.01
SMC3Q9UQE7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 CENPCP1-201ENST00000533085 2578 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 RNY4P16-201ENST00000364768 94 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 AC007283.2-201ENST00000424739 197 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 AC104651.1-201ENST00000427559 735 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 MTCYBP39-201ENST00000437562 491 ntBASIC2.46□□□□□ -2.02
SMC3Q9UQE7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMC3Q9UQE7 AC124916.1-201ENST00000444020 547 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms