Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC009977.1-201ENST00000586015 570 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 AC007363.1-201ENST00000604736 620 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 MTND4LP5-201ENST00000605152 292 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 AC025594.3-201ENST00000613068 790 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 AC010378.1-201ENST00000619270 362 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 AC097520.1-201ENST00000624435 385 ntBASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.3□□□□□ -2.04
UBQLN1Q9UMX0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-461P-201ENST00000364195 107 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 SMIM11P1-201ENST00000369586 178 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 SNORA26.8-201ENST00000391306 124 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL513475.1-201ENST00000406602 315 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 RNU4-26P-201ENST00000410270 107 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 Y_RNA.598-201ENST00000410480 95 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC006366.1-201ENST00000422002 759 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 RAC1P6-201ENST00000423911 575 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL121890.1-201ENST00000435457 205 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 DPPA3P1-201ENST00000448050 469 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL118520.1-201ENST00000450770 291 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 CECR9-201ENST00000453421 199 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 SNRPFP4-201ENST00000456366 242 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 MRPS17P3-201ENST00000465453 385 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 RPL37P25-201ENST00000507308 276 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC104984.5-201ENST00000586878 94 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.6-201ENST00000603753 252 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.11-201ENST00000604059 253 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC008162.1-201ENST00000604718 254 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.1-201ENST00000604752 252 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.5-201ENST00000605253 252 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.12-201ENST00000605291 253 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.8-201ENST00000605353 252 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC004805.2-201ENST00000605382 482 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL670379.7-201ENST00000605823 252 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 AC091304.9-201ENST00000612091 226 ntBASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN1Q9UMX0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 UBE2L2-201ENST00000254302 429 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-778P-201ENST00000363269 103 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-884P-201ENST00000363889 107 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-960P-201ENST00000364056 120 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-817P-201ENST00000391083 104 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RPS15AP12-201ENST00000419498 388 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SKA2P1-201ENST00000425592 390 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AL589872.1-201ENST00000426602 288 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 NEFMP1-201ENST00000443423 1006 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RPS27AP8-201ENST00000452665 445 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RAP1BP2-201ENST00000478270 544 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 BET1P1-201ENST00000482276 359 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC010587.1-201ENST00000505809 469 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC114786.4-201ENST00000508771 728 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU2-10P-201ENST00000516375 211 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 RNU6-1092P-201ENST00000516955 87 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 SUB1P1-201ENST00000524415 382 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 COX6CP5-201ENST00000527162 228 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 Z94722.1-201ENST00000604328 474 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC121247.2-201ENST00000604776 136 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC091931.1-201ENST00000623488 728 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 CU459211.1-201ENST00000635667 749 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 AC135776.4-201ENST00000624300 1904 ntBASIC2.28□□□□□ -2.04
UBQLN1Q9UMX0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
UBQLN1Q9UMX0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.28□□□□□ -2.05
UBQLN1Q9UMX0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN1Q9UMX0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms