Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 CYCSP43-201ENST00000438233 310 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC234775.1-201ENST00000454247 670 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 RPL9P32-201ENST00000464118 620 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 RPL21P103-201ENST00000479921 488 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 MTND1P19-201ENST00000511780 315 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 CYCSP27-201ENST00000527643 293 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AL606490.9-201ENST00000603331 271 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AL137849.1-201ENST00000604767 169 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC002044.1-201ENST00000606707 158 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC007998.5-201ENST00000622938 237 ntBASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
PACSIN3Q9UKS6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC233263.6-201ENST00000631132 1963 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MTND5P7-201ENST00000413558 1798 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.26-201ENST00000362539 101 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RNY3P11-201ENST00000364153 102 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.380-201ENST00000365663 111 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RNU6-14P-201ENST00000384630 106 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 SNORA41-201ENST00000384675 132 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MT-TC-201ENST00000387405 66 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MIR1252-201ENST00000408861 65 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RN7SKP202-201ENST00000410439 330 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AL356968.1-201ENST00000416622 474 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC099677.1-201ENST00000420575 175 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AL691449.1-201ENST00000426570 421 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 NEFMP1-201ENST00000443423 1006 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC108860.1-201ENST00000484521 383 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RNU6-475P-201ENST00000516073 104 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC022616.4-201ENST00000522985 181 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AP000889.1-201ENST00000530968 660 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 YPEL5P3-201ENST00000547227 352 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 AC120057.2-201ENST00000571520 271 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 ELOCP5-201ENST00000604924 333 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 CEP170P1-201ENST00000502249 4587 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 DDX10P1-201ENST00000448545 1933 ntBASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PACSIN3Q9UKS6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 MAPK10-372ENST00000641954 3413 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AL137003.2-201ENST00000606924 2538 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.48-201ENST00000362710 103 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.288-201ENST00000364854 92 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 RNU6-214P-201ENST00000384130 107 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 Y_RNA.552-201ENST00000384665 112 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 MIR135A2-201ENST00000384854 100 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 MIR554-201ENST00000384874 96 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 MIR517A-201ENST00000385001 87 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 BX276092.3-201ENST00000424182 230 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 RPL29P29-201ENST00000448725 423 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 PPIAP15-201ENST00000479662 484 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 RNU2-53P-201ENST00000516257 147 ntBASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.61□□□□□ -1.83
PACSIN3Q9UKS6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms