Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 Y_RNA.67-201ENST00000362870 100 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 RNU6-1155P-201ENST00000363554 107 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 RNU6-1164P-201ENST00000364428 107 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.65□□□□□ -2.3
SCN11AQ9UI33 CST2P1-201ENST00000425770 87 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AC092573.2-201ENST00000434546 243 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.65□□□□□ -2.3
SCN11AQ9UI33 RNF138P1-201ENST00000502765 546 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.65□□□□□ -2.3
SCN11AQ9UI33 HMGB1P14-201ENST00000557424 591 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AC005668.1-201ENST00000571142 476 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 AC097372.4-201ENST00000625025 466 ntBASIC0.65□□□□□ -2.3
SCN11AQ9UI33 MIR424-201ENST00000362227 98 ntBASIC0.65□□□□□ -2.31
SCN11AQ9UI33 Y_RNA.60-201ENST00000362831 98 ntBASIC0.65□□□□□ -2.31
SCN11AQ9UI33 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
SCN11AQ9UI33 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN11AQ9UI33 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN11AQ9UI33 AC093677.1-201ENST00000514414 678 ntBASIC0.65□□□□□ -2.31
SCN11AQ9UI33 RNU6-322P-201ENST00000516010 103 ntBASIC0.65□□□□□ -2.31
SCN11AQ9UI33 AC010620.1-201ENST00000601088 1102 ntBASIC0.65□□□□□ -2.31
SCN11AQ9UI33 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SCN11AQ9UI33 RNU6-1074P-201ENST00000383995 104 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 Y_RNA.518-201ENST00000384552 113 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 NDUFS5P1-201ENST00000405668 289 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 RPS24P7-201ENST00000416921 246 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.64□□□□□ -2.31
SCN11AQ9UI33 AC004854.1-201ENST00000440356 349 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.64□□□□□ -2.31
SCN11AQ9UI33 SNORA62.5-201ENST00000516634 120 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
SCN11AQ9UI33 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 AC068057.2-201ENST00000624047 895 ntBASIC0.64□□□□□ -2.31
SCN11AQ9UI33 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 VN1R42P-201ENST00000424651 344 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN11AQ9UI33 RNA5SP112-201ENST00000515937 99 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 CYP4A27P-201ENST00000567218 190 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 AC012435.1-202ENST00000568772 240 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN11AQ9UI33 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN11AQ9UI33 AC068787.1-201ENST00000623908 691 ntBASIC0.63□□□□□ -2.31
SCN11AQ9UI33 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SCN11AQ9UI33 MIR515-2-201ENST00000384883 83 ntBASIC0.62□□□□□ -2.31
SCN11AQ9UI33 MIR515-1-201ENST00000384884 83 ntBASIC0.62□□□□□ -2.31
SCN11AQ9UI33 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN11AQ9UI33 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN11AQ9UI33 RNU6-185P-201ENST00000384421 107 ntBASIC0.62□□□□□ -2.31
SCN11AQ9UI33 AP003973.1-201ENST00000604639 691 ntBASIC0.62□□□□□ -2.31
SCN11AQ9UI33 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 SNORA63.3-201ENST00000362682 132 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 RNU4-31P-201ENST00000384211 141 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 MT-TC-201ENST00000387405 66 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 RPL7P29-201ENST00000437151 728 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AC073614.1-201ENST00000438690 650 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AL035666.1-201ENST00000446195 348 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 RNU6-319P-201ENST00000516025 108 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN11AQ9UI33 MIR4653-201ENST00000585107 83 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 HMGN1P30-201ENST00000589286 268 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 BX322635.1-201ENST00000605804 496 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AL138478.1-201ENST00000612252 832 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AC126177.8-201ENST00000618339 1015 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 AC024595.1-201ENST00000623088 387 ntBASIC0.61□□□□□ -2.31
SCN11AQ9UI33 RNU6-288P-201ENST00000363690 104 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 RNU6-1222P-201ENST00000384615 107 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 RNA5SP56-201ENST00000410277 118 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC019070.1-201ENST00000415008 1024 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 GTF2IP20-201ENST00000431663 360 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC025857.1-201ENST00000525252 377 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 APOOP3-201ENST00000536787 586 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 MIR4636-201ENST00000582271 80 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 MTCO2P22-201ENST00000603246 681 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 MTCYBP22-201ENST00000603788 447 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC087045.1-201ENST00000605856 382 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC110792.4-201ENST00000609843 298 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC012676.2-201ENST00000619258 186 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 Y_RNA.390-201ENST00000383932 102 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 MIR1912-201ENST00000410389 80 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AL356432.3-201ENST00000568952 465 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AC008751.2-201ENST00000597885 980 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AL021997.1-201ENST00000605757 193 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 AL078604.3-201ENST00000615580 211 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms