Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC098826.3-201ENST00000603823 466 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 SNORA51-201ENST00000606420 132 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 PART1_1.1-201ENST00000611761 217 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC006133.1-201ENST00000617106 264 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 AL133216.2-202ENST00000634512 349 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP25Q9UHP3 UBE2L2-201ENST00000254302 429 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RNU6-692P-201ENST00000384496 107 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AL590004.1-201ENST00000405321 300 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 MTCO2P12-201ENST00000427426 682 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RPL23AP82-202ENST00000427528 469 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC236972.2-201ENST00000434979 310 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 PRPS1P1-201ENST00000445305 876 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 SNORD19B-201ENST00000459623 84 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RPL23AP67-201ENST00000465341 474 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 RPL7P5-201ENST00000471472 736 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 HMGN2P13-201ENST00000476476 274 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC104806.1-201ENST00000508720 308 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC010265.1-201ENST00000513509 211 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AL163153.1-201ENST00000554223 283 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AMZ2P1-203ENST00000565833 850 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 MIR5583-1-201ENST00000580941 59 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC073476.4-201ENST00000628409 72 ntBASIC3.94□□□□□ -1.78
USP25Q9UHP3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP25Q9UHP3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.94□□□□□ -1.78
USP25Q9UHP3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
USP25Q9UHP3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP25Q9UHP3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP25Q9UHP3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP25Q9UHP3 SNORD56.3-201ENST00000363507 71 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 RNU6-550P-201ENST00000391057 101 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC018644.1-201ENST00000429934 551 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.93□□□□□ -1.78
USP25Q9UHP3 RN7SL542P-201ENST00000467147 294 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 APOOP4-201ENST00000513530 597 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 SNORA67.7-201ENST00000516664 135 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 MIR3158-1-201ENST00000583596 81 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC008521.1-201ENST00000587471 187 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC136601.2-201ENST00000604356 474 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AL161798.1-201ENST00000604630 131 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC107294.3-201ENST00000609211 526 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 MTND5P42-201ENST00000637720 498 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AC119674.1-207ENST00000641355 633 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 AL356274.2-201ENST00000624379 3752 ntBASIC3.93□□□□□ -1.78
USP25Q9UHP3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP25Q9UHP3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP25Q9UHP3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 MAPK10-362ENST00000641864 4484 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU6-288P-201ENST00000363690 104 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU6-190P-201ENST00000384154 102 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU6-217P-201ENST00000384164 104 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU6-140P-201ENST00000384566 108 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 SNORA48.8-201ENST00000391324 134 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RN7SKP111-201ENST00000410349 271 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RPS12P24-201ENST00000412619 387 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms