Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RPL21P11-201ENST00000461458 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL21P39-201ENST00000463605 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPS29P27-201ENST00000463711 170 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL21P104-201ENST00000464143 478 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC132942.1-201ENST00000486753 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC093591.1-201ENST00000491435 481 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL21P16-201ENST00000495531 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 Y_RNA.706-201ENST00000516933 99 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 SYF2P1-201ENST00000550658 413 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 PARP1P2-201ENST00000556806 195 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 MED28P6-201ENST00000558776 231 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL23AP97-201ENST00000568955 471 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 MIR3939-201ENST00000582614 106 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 MIR376A1-201ENST00000616574 68 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AL445567.2-201ENST00000618935 498 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC007546.2-201ENST00000623996 360 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTN3Q9P232 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTN3Q9P232 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTN3Q9P232 snoU2_19.2-201ENST00000363024 80 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 RNU6-280P-201ENST00000364145 104 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.358-201ENST00000365491 99 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.405-201ENST00000383979 100 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.451-201ENST00000384200 100 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.462-201ENST00000384268 102 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.524-201ENST00000384564 100 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.561-201ENST00000384694 100 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 RNU2-33P-201ENST00000410344 192 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 RPL23AP26-201ENST00000412728 464 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 RPL27AP8-201ENST00000424277 446 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 AL590383.1-201ENST00000428602 75 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 BX679664.1-201ENST00000434429 253 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 PIGFP3-201ENST00000441918 722 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 AC091167.1-201ENST00000492017 396 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 RN7SL691P-201ENST00000494487 301 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AC010469.2-201ENST00000496412 480 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 SNORA31.19-201ENST00000517079 126 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AP002770.2-201ENST00000543613 532 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 AC130289.1-201ENST00000577321 73 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 RPL23AP78-201ENST00000599928 470 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AL160290.3-201ENST00000604869 165 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 Y_RNA.772-201ENST00000606692 102 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 MIR3653-201ENST00000625572 110 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTN3Q9P232 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
CNTN3Q9P232 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTN3Q9P232 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTN3Q9P232 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.71□□□□□ -1.65
CNTN3Q9P232 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.71□□□□□ -1.65
CNTN3Q9P232 AC018529.3-201ENST00000624212 2254 ntBASIC4.71□□□□□ -1.65
CNTN3Q9P232 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CNTN3Q9P232 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNTN3Q9P232 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.71□□□□□ -1.66
CNTN3Q9P232 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNTN3Q9P232 RNU5E-7P-201ENST00000365290 117 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 RNU6-741P-201ENST00000383889 107 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 RNU6-166P-201ENST00000384371 107 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 MIR215-201ENST00000384858 110 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 RNA5SP36-201ENST00000410197 133 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 RNU2-14P-201ENST00000411053 191 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AP000275.1-201ENST00000411943 390 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 TMEM167AP1-201ENST00000423409 219 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 RPL23AP22-201ENST00000437556 453 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AL392103.1-201ENST00000447000 198 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AL138752.1-201ENST00000452964 351 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AL139109.1-201ENST00000455491 297 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.71□□□□□ -1.66
CNTN3Q9P232 UQCRHP4-201ENST00000471686 272 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AC108022.1-201ENST00000493466 478 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AC108043.1-201ENST00000512696 574 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 CASP1P1-201ENST00000526345 212 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AC004024.1-201ENST00000549244 247 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 MIR4300-201ENST00000581016 96 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AL021997.2-201ENST00000615674 271 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 AC027309.3-201ENST00000623419 351 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 U6.92-201ENST00000636464 89 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms