Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC092807.2-201ENST00000609367 243 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AP003400.5-201ENST00000624827 617 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC058791.1-201ENST00000608412 3198 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL136164.4-201ENST00000625013 2135 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 MIR422A-201ENST00000362286 90 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 Y_RNA.530-201ENST00000384587 101 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 SNORA16.2-201ENST00000390991 127 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 RNU6-1025P-201ENST00000410629 104 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 Y_RNA.615-201ENST00000410769 117 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL669831.1-202ENST00000428504 417 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 GTF2IP13-201ENST00000438487 386 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 PRPS1P1-201ENST00000445305 876 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 RPL7P12-201ENST00000446719 750 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL590639.1-201ENST00000456484 337 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 PMCHL2-203ENST00000457791 237 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 RPL27AP5-201ENST00000469428 449 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 RPL30P14-201ENST00000482744 348 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 MTCO2P30-201ENST00000503662 364 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 RNU2-69P-201ENST00000516061 100 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 RNU6-1038P-201ENST00000516516 104 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC023050.3-201ENST00000541142 333 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 PSMA3P-201ENST00000555485 635 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 MIR3609-201ENST00000582661 80 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC092747.3-201ENST00000603769 301 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 FTX_3.1-201ENST00000610451 147 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 DUSP12P1-201ENST00000612874 516 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL162274.2-201ENST00000614406 332 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC063943.3-201ENST00000615562 356 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC022418.1-201ENST00000624118 445 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC090617.10-201ENST00000624308 134 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL20A1Q9P218 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
COL20A1Q9P218 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
COL20A1Q9P218 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL20A1Q9P218 FTLP6-201ENST00000355274 422 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 RNU6-522P-201ENST00000364497 107 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 RNU5E-4P-201ENST00000364931 120 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 Y_RNA.378-201ENST00000365652 113 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 RNU6-767P-201ENST00000384132 107 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 Y_RNA.480-201ENST00000384364 102 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 RNU6-1035P-201ENST00000384477 107 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AL122016.1-201ENST00000403365 367 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 BX682237.1-201ENST00000415016 335 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC006445.2-201ENST00000510061 472 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC046134.1-201ENST00000514454 666 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 Y_RNA.665-201ENST00000516177 98 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AL118558.2-201ENST00000556294 238 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 UBE2V2P2-201ENST00000587677 504 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AL355598.1-201ENST00000604169 202 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC008962.1-201ENST00000605729 304 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC025253.1-201ENST00000613623 543 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AC103705.1-201ENST00000619013 241 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 MTND4P35-201ENST00000604257 1375 ntBASIC3.6□□□□□ -1.83
COL20A1Q9P218 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL20A1Q9P218 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms