Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 SNORA22B-201ENST00000383876 138 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 EI24P2-201ENST00000397776 1076 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AL445529.1-201ENST00000398713 389 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 PMCHL1-202ENST00000423102 261 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC018865.2-201ENST00000423631 129 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC007919.1-201ENST00000429380 217 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 H2AFZP6-201ENST00000444403 394 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 RPS23P3-201ENST00000470993 430 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 RPL7P5-201ENST00000471472 736 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 HMGN1P11-201ENST00000508668 303 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 SNORA25.10-201ENST00000515926 124 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 RNU6-264P-201ENST00000517134 104 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 YPEL5P3-201ENST00000547227 352 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 ELOCP5-201ENST00000604924 333 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AL160281.1-201ENST00000605307 311 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC018889.1-201ENST00000605372 397 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC011890.2-201ENST00000613393 294 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC099506.2-201ENST00000623074 221 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 MIR6830-201ENST00000636015 70 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC007823.1-201ENST00000569932 1566 ntBASIC3.5□□□□□ -1.85
VSX1Q9NZR4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX1Q9NZR4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC138393.1-203ENST00000327086 343 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RNA5SP130-201ENST00000364431 114 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC068538.1-201ENST00000376856 336 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AL030996.1-201ENST00000411430 235 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AL158071.1-201ENST00000430315 461 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 PIGFP3-201ENST00000441918 722 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 KC877373.1-201ENST00000479066 408 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RNU1-86P-201ENST00000516108 154 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 Y_RNA.670-201ENST00000516255 105 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 SNORA31.9-201ENST00000516429 84 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RNU1-107P-201ENST00000516617 154 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC007991.1-201ENST00000522680 631 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC025884.1-201ENST00000556034 378 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AL355598.1-201ENST00000604169 202 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC091167.4-201ENST00000605079 184 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC040896.1-201ENST00000613819 479 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC083806.3-201ENST00000614016 455 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC027309.3-201ENST00000623419 351 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
VSX1Q9NZR4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX1Q9NZR4 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNU6-890P-201ENST00000384121 107 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNU6-933P-201ENST00000384424 107 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 SNORA40C-201ENST00000391285 128 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 HLFP1-201ENST00000402375 499 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNU6-1304P-201ENST00000411374 106 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RPS15AP10-201ENST00000432472 382 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC008571.1-201ENST00000467232 300 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC114801.2-201ENST00000503825 781 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNU6-470P-201ENST00000515954 104 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RNA5SP179-201ENST00000517284 121 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 MRPL49P2-201ENST00000521066 465 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC090877.1-201ENST00000561418 344 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC011494.1-201ENST00000596454 237 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC136601.2-201ENST00000604356 474 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AP001836.1-201ENST00000604675 523 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 MIR6810-201ENST00000622701 70 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AC048347.1-201ENST00000624621 427 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 Z69720.2-201ENST00000624755 279 ntBASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AL078596.1-201ENST00000624856 447 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms