Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR4307-201ENST00000582802 84 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC007229.1-201ENST00000590455 412 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC112187.2-201ENST00000604345 283 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC138627.2-201ENST00000624202 601 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC243829.7-201ENST00000633081 225 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 MTND5P42-201ENST00000637720 498 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC006020.1-201ENST00000420179 1854 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC092104.1-201ENST00000497346 1441 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 MTND5P6-201ENST00000422338 1798 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 Y_RNA.302-201ENST00000364997 102 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL133475.1-201ENST00000404414 305 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 RNU2-36P-201ENST00000410361 191 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 MYL8P-204ENST00000431574 518 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC009238.1-201ENST00000442165 424 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC009237.6-201ENST00000446969 424 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 MTCO1P42-201ENST00000457379 726 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC117503.1-201ENST00000472241 394 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 FAM92A1P1-201ENST00000528023 890 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL049838.1-201ENST00000563647 981 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 MIR3162-201ENST00000581818 82 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 BNIP3P40-201ENST00000596017 556 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AP000860.1-201ENST00000605250 559 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC108747.1-201ENST00000609508 535 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL365204.3-201ENST00000612448 685 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL139418.1-201ENST00000613613 177 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 uc_338.12-201ENST00000616344 181 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AL607023.1-201ENST00000620045 248 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC006927.4-201ENST00000639187 543 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLN6Q9NWW5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.82□□□□□ -2.12
CLN6Q9NWW5 AC138393.1-203ENST00000327086 343 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 SMIM11P1-201ENST00000369586 178 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 RNU6-253P-201ENST00000384730 105 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC006366.1-201ENST00000422002 759 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL022400.1-201ENST00000423946 935 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 RPL7P34-201ENST00000433316 712 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC114781.4-201ENST00000513707 639 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 RNU6-1315P-201ENST00000517187 99 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC026464.5-201ENST00000562497 722 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC009097.3-201ENST00000563557 1018 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC012435.1-202ENST00000568772 240 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 MTCO2P2-201ENST00000591258 225 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL670379.10-201ENST00000604330 253 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL670379.9-201ENST00000605428 253 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC022893.3-201ENST00000607665 437 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL391813.2-201ENST00000609113 322 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL391834.2-201ENST00000609982 546 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AC017037.3-201ENST00000625016 472 ntBASIC1.81□□□□□ -2.12
CLN6Q9NWW5 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.81□□□□□ -2.12
CLN6Q9NWW5 AL136360.1-201ENST00000503377 1900 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC009487.4-201ENST00000624969 3585 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 Y_RNA.18-201ENST00000362461 102 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 RNU1-72P-201ENST00000362976 153 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 RNU6-190P-201ENST00000384154 102 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 U8.14-201ENST00000390843 143 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 RNU6-1025P-201ENST00000410629 104 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 Z92545.1-201ENST00000411782 234 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 EDDM3CP-201ENST00000415977 425 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms