Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AP000860.1-201ENST00000605250 559 ntBASIC2.53□□□□□ -2
RBM28Q9NW13 AC107294.1-201ENST00000609524 467 ntBASIC2.53□□□□□ -2
RBM28Q9NW13 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.53□□□□□ -2
RBM28Q9NW13 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.53□□□□□ -2
RBM28Q9NW13 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
RBM28Q9NW13 AC120349.3-201ENST00000624377 529 ntBASIC2.53□□□□□ -2
RBM28Q9NW13 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.53□□□□□ -2
RBM28Q9NW13 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.53□□□□□ -2
RBM28Q9NW13 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RBM28Q9NW13 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RBM28Q9NW13 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
RBM28Q9NW13 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.53□□□□□ -2.01
RBM28Q9NW13 CKAP2P1-201ENST00000555477 2049 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RBM28Q9NW13 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNU6-553P-201ENST00000364047 96 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNY4P16-201ENST00000364768 94 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNU6-533P-201ENST00000384144 107 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 SNORA3.2-201ENST00000408221 125 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNU2-62P-201ENST00000410868 191 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNU6-920P-201ENST00000410926 92 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RN7SKP192-201ENST00000411291 327 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 BPY2DP-201ENST00000422208 265 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 HMGB1P9-201ENST00000429856 646 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 MTND5P25-201ENST00000430499 799 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 RPL7P34-201ENST00000433316 712 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 RPL37P6-201ENST00000460682 294 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RPF2P2-201ENST00000504693 896 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 SNORA31.3-201ENST00000516029 96 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RBM28Q9NW13 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 MRPS36P5-201ENST00000551909 298 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 PCMTD1P2-201ENST00000565017 355 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 ROCK1P1-201ENST00000573767 549 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC104984.5-201ENST00000586878 94 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC025594.3-201ENST00000613068 790 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC027807.2-201ENST00000616099 408 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC091304.6-201ENST00000619761 202 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AP000770.2-201ENST00000623694 100 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC079248.2-201ENST00000623779 326 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.52□□□□□ -2.01
RBM28Q9NW13 AC006927.3-201ENST00000638789 384 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
RBM28Q9NW13 RNY3P13-201ENST00000365542 102 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 RNU6-1083P-201ENST00000384022 107 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 RNU5A-2P-201ENST00000384337 116 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 NDUFS5P4-201ENST00000412983 318 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AL353777.1-201ENST00000425552 326 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC093106.2-201ENST00000428212 385 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 MTND1P28-201ENST00000435623 950 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 KATNBL1P6-201ENST00000453433 915 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 BZW1P2-201ENST00000473537 826 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC098591.2-201ENST00000510152 315 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC022616.6-201ENST00000520479 119 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 ARL2BPP2-201ENST00000550907 489 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 RPS3AP4-201ENST00000555161 764 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 LRRC37A5P-203ENST00000580181 585 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 MIR3146-201ENST00000580367 79 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 MIR3945-201ENST00000581853 98 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 MIR4448-201ENST00000584360 86 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC008749.1-201ENST00000597650 306 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AL022161.1-201ENST00000604390 213 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RBM28Q9NW13 MIR7844-201ENST00000616161 122 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 AC091953.2-201ENST00000623979 160 ntBASIC2.51□□□□□ -2.01
RBM28Q9NW13 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RBM28Q9NW13 Y_RNA.169-201ENST00000363745 96 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 SNORA16B-201ENST00000364674 135 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.5□□□□□ -2.01
RBM28Q9NW13 MED14P1-201ENST00000430517 648 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 AL445567.1-201ENST00000439121 144 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 AC098831.1-201ENST00000440661 216 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.5□□□□□ -2.01
RBM28Q9NW13 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.5□□□□□ -2.01
RBM28Q9NW13 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
RBM28Q9NW13 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.5□□□□□ -2.01
RBM28Q9NW13 OR5AQ1P-201ENST00000527596 927 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 AP003181.2-201ENST00000528941 181 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 DUXAP5-201ENST00000529668 529 ntBASIC2.5□□□□□ -2.01
RBM28Q9NW13 NACAP3-201ENST00000552100 481 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms