Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RNU6-875P-201ENST00000516488 106 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AP000889.2-201ENST00000532684 490 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 YPEL5P3-201ENST00000547227 352 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 MIR3672-201ENST00000584290 82 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 KLKP1-201ENST00000595979 403 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC005261.5-201ENST00000596280 355 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 VN1R85P-201ENST00000601587 426 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC010378.1-201ENST00000619270 362 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AL133216.2-202ENST00000634512 349 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 SNORD81.2-201ENST00000365153 76 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RNU1-100P-201ENST00000365255 165 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 SNORD73A-201ENST00000386062 65 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RN7SKP32-201ENST00000410167 303 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC022028.1-201ENST00000412054 408 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RPS15AP6-201ENST00000420703 385 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AL359672.1-201ENST00000442302 409 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RPL23AP45-201ENST00000476406 468 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC116655.1-201ENST00000508324 901 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC113155.1-201ENST00000511141 769 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC114781.4-201ENST00000513707 639 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AP005597.4-201ENST00000526762 229 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 AC009994.1-201ENST00000606889 253 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 RNVU1-4-201ENST00000612985 164 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 MIR6875-201ENST00000617506 72 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 U7.8-201ENST00000619968 63 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 SCARNA4-202ENST00000625402 129 ntBASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIN7CQ9NUP9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.166-201ENST00000363730 102 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 U1.1-201ENST00000384101 164 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 MIR1193-201ENST00000408109 78 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 SNORD56-201ENST00000413522 71 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 TBCAP1-201ENST00000436520 327 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AL161651.1-201ENST00000440882 223 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AL031274.1-201ENST00000450334 232 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 RNU7-170P-201ENST00000459303 61 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AP004607.1-201ENST00000524456 203 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 CYCSP30-201ENST00000546447 172 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC025281.1-201ENST00000567026 265 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC010653.1-201ENST00000571108 881 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC063943.3-201ENST00000615562 356 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 RMST_7.1-201ENST00000621935 268 ntBASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
LIN7CQ9NUP9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms