Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 ELOCP23-201ENST00000452014 332 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 KC877373.1-201ENST00000479066 408 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 RNU6-123P-201ENST00000516163 102 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 IGHV3-76-201ENST00000522465 295 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AL137161.1-201ENST00000532231 390 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 TGIF1P1-201ENST00000558095 802 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC005261.5-201ENST00000596280 355 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AL158032.1-201ENST00000605401 106 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC069234.5-201ENST00000611056 416 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 uc_338.34-201ENST00000617467 174 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC090617.10-201ENST00000624308 134 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MTND5P42-201ENST00000637720 498 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC004944.1-201ENST00000517807 3059 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC091564.4-201ENST00000533934 2194 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 RNU6-845P-201ENST00000362578 103 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 RNU4-35P-201ENST00000362588 141 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 MIR888-201ENST00000401186 77 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 MIR1289-1-201ENST00000408836 144 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 RPL7P12-201ENST00000446719 750 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 TRBV1-201ENST00000476502 284 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC093331.1-201ENST00000521474 169 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AL138889.2-201ENST00000603883 242 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AL161798.1-201ENST00000604630 131 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AL670379.4-201ENST00000605279 254 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AL136221.1-201ENST00000621449 509 ntBASIC3.56□□□□□ -1.84
VPS45Q9NRW7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS45Q9NRW7 AL353743.1-202ENST00000431724 1695 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AL035425.3-201ENST00000564206 4996 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC008669.1-201ENST00000565823 2178 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.263-201ENST00000364659 114 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RNU6-116P-201ENST00000384042 109 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 MT-TD-201ENST00000387419 68 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AL592114.1-201ENST00000403842 483 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RPL35AP12-201ENST00000425362 338 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC007919.1-201ENST00000429380 217 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 MTND3P23-201ENST00000431980 347 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC093019.1-201ENST00000443135 252 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 FABP5P15-201ENST00000453566 214 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC010099.1-201ENST00000455434 375 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC007547.1-201ENST00000462177 490 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 APOOP4-201ENST00000513530 597 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 SNORA70.19-201ENST00000516717 90 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RNA5SP290-201ENST00000517133 127 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AP000867.2-201ENST00000532468 320 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC243972.3-201ENST00000539655 198 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 LARP7P3-201ENST00000579888 337 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC098826.3-201ENST00000603823 466 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 FTX_3.1-201ENST00000610451 147 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC093913.1-201ENST00000614178 329 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC073308.1-201ENST00000623696 305 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS45Q9NRW7 AC073544.1-201ENST00000600110 1595 ntBASIC3.55□□□□□ -1.84
VPS45Q9NRW7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS45Q9NRW7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS45Q9NRW7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS45Q9NRW7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS45Q9NRW7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS45Q9NRW7 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms