Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC013553.2-201ENST00000604244 589 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 ZNF807-201ENST00000328088 1707 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.88-201ENST00000363029 99 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.303-201ENST00000364998 94 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SNORA54-201ENST00000384281 123 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 MIR325-201ENST00000385260 98 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RNU6-550P-201ENST00000391057 101 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.604-201ENST00000410574 102 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 OR6C66P-201ENST00000414917 930 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SNRPEP10-201ENST00000420249 274 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 NDUFB4P7-201ENST00000423198 363 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC092573.2-201ENST00000434546 243 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 CBWD4P-201ENST00000445695 655 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 MTND3P16-201ENST00000452205 344 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RPS29P25-201ENST00000481709 171 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC117522.3-201ENST00000507974 584 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RNU4-29P-201ENST00000515943 174 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SNORA31.1-201ENST00000515993 133 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SNORA31.5-201ENST00000516190 133 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 SNORD60.2-201ENST00000516883 86 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 PSMA2P1-201ENST00000526365 646 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC174048.1-201ENST00000603389 144 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AL359547.2-201ENST00000615810 418 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 AC100810.6-201ENST00000638068 285 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 OR4G1P-203ENST00000641984 1631 ntBASIC3.06□□□□□ -1.92
PCDH9Q9HC56 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.86-201ENST00000363020 111 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RNU6-1167P-201ENST00000363227 94 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.160-201ENST00000363677 92 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 SNORA71.1-201ENST00000364523 117 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 MT-TL1-201ENST00000386347 75 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RNU6-817P-201ENST00000391083 104 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RNU6-332P-201ENST00000391193 108 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 U3.42-201ENST00000408746 214 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RNU6-387P-201ENST00000411331 105 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AL590383.1-201ENST00000428602 75 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AL592045.1-201ENST00000429867 352 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 PIGFP3-201ENST00000441918 722 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 CALM1P1-201ENST00000442082 433 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RPS3AP12-201ENST00000443616 753 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AL671855.1-201ENST00000446875 1203 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AC117440.1-201ENST00000474107 571 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 KC877373.1-201ENST00000479066 408 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 RNU6-1038P-201ENST00000516516 104 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 SNORA70.24-201ENST00000517233 118 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AF235103.2-201ENST00000525753 346 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AP005205.1-201ENST00000563503 508 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 MIR5583-1-201ENST00000580941 59 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 BNIP3P22-201ENST00000593399 556 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AC012119.1-201ENST00000603184 222 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 BNIP3P9-201ENST00000603714 553 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AC098826.3-201ENST00000603823 466 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AL035413.2-201ENST00000604801 525 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 MIR15A-201ENST00000607334 83 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 uc_338.11-201ENST00000619132 160 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 AC090617.7-201ENST00000623952 126 ntBASIC3.05□□□□□ -1.92
PCDH9Q9HC56 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH9Q9HC56 TPTE2P4-201ENST00000258589 1605 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC103710.2-202ENST00000641454 2853 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 MIR422A-201ENST00000362286 90 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms