Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 Z82243.1-201ENST00000609432 473 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 DUSP12P1-201ENST00000612874 516 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC093913.1-201ENST00000614178 329 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL110115.1-201ENST00000614396 364 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC103705.1-201ENST00000619013 241 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL133216.2-202ENST00000634512 349 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 UBE2L2-201ENST00000254302 429 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.301-201ENST00000364990 103 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNU6-715P-201ENST00000365204 103 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 MIR490-201ENST00000384865 128 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AL139039.1-201ENST00000401900 692 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNA5SP120-201ENST00000410900 112 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNA5SP111-201ENST00000411386 101 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC080125.1-201ENST00000414888 684 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 HMGB3P11-201ENST00000440127 604 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 CYCSP32-201ENST00000440548 321 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC008264.1-201ENST00000447612 367 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNU2-69P-201ENST00000516061 100 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNU6-277P-201ENST00000516272 106 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 RNU6-1256P-201ENST00000516539 103 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.691-201ENST00000516611 103 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC107934.2-201ENST00000518653 310 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 GLYCAM1-201ENST00000546596 285 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 SYF2P1-201ENST00000550658 413 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC098826.3-201ENST00000603823 466 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AP002826.1-201ENST00000608835 315 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 TPTEP1-208ENST00000636884 213 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
USP29Q9HBJ7 AC090740.1-201ENST00000623193 2262 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AP001148.1-201ENST00000624124 2359 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 RNU6-393P-201ENST00000384475 107 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.535-201ENST00000384612 99 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 MIR1290-201ENST00000408735 78 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 RPL23AP67-201ENST00000465341 474 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 RPS20P22-201ENST00000473700 357 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 SUMO2P6-201ENST00000505273 288 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 HMGB3P15-201ENST00000507326 574 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 RNU6-864P-201ENST00000516256 108 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC090136.1-201ENST00000520009 240 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC092747.3-201ENST00000603769 301 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AL161798.1-201ENST00000604630 131 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 AC005000.2-201ENST00000605468 310 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 uc_338.5-201ENST00000611839 155 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.47□□□□□ -1.85
USP29Q9HBJ7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP29Q9HBJ7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.85
USP29Q9HBJ7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
USP29Q9HBJ7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP29Q9HBJ7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
USP29Q9HBJ7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USP29Q9HBJ7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
USP29Q9HBJ7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.46□□□□□ -1.86
USP29Q9HBJ7 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms