Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 BTF3P15-201ENST00000455606 336 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AL583843.1-201ENST00000456070 346 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC008155.2-201ENST00000464337 397 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RPL27AP5-201ENST00000469428 449 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC104136.1-201ENST00000512969 394 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC112206.3-201ENST00000514578 389 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RNU6-718P-201ENST00000516166 105 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 MTND4P7-201ENST00000523876 130 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AP005435.4-201ENST00000529514 284 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 BNIP3P6-201ENST00000549284 499 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC021739.1-201ENST00000559631 174 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 LINC00933-203ENST00000559812 219 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC234778.2-201ENST00000566241 354 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC026585.1-201ENST00000619582 524 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 YWHAEP7-203ENST00000622054 312 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC002064.3-201ENST00000623448 346 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AL354685.2-201ENST00000448218 1447 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 U3.6-201ENST00000363622 211 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 RNU6-1090P-201ENST00000364065 94 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.450-201ENST00000384198 113 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MIR578-201ENST00000384828 96 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AL627311.1-201ENST00000431514 115 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 UBE2V1P8-201ENST00000437166 265 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 WASF1P1-201ENST00000447560 1131 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 SCARNA18-201ENST00000459004 134 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC022493.1-201ENST00000492984 337 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 LRRC34P2-201ENST00000514850 553 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 RNU4-29P-201ENST00000515943 174 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MTND1P35-201ENST00000526739 508 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AL137161.1-201ENST00000532231 390 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC037471.2-201ENST00000564941 598 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC007151.1-201ENST00000572774 483 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MIR3158-1-201ENST00000583596 81 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC020895.1-201ENST00000595362 272 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AL451007.1-201ENST00000595491 289 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 uc_338.34-201ENST00000617467 174 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MIR6134-201ENST00000617606 109 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 AC010338.1-201ENST00000621823 717 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MIR1321-201ENST00000637766 79 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BRF2Q9HAW0 MTND5P27-201ENST00000428871 1720 ntBASIC3.05□□□□□ -1.92
BRF2Q9HAW0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC010889.1-201ENST00000566193 2666 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 CDC27P3-201ENST00000635418 1910 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AL139276.1-201ENST00000311910 1001 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.453-201ENST00000384223 109 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 RNU6-45P-201ENST00000384471 107 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 RNU6-393P-201ENST00000384475 107 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 SNORD70.1-201ENST00000391007 85 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 BTF3P7-201ENST00000407097 488 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 USP9YP18-201ENST00000425912 695 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC097713.2-201ENST00000430199 356 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 OSTCP8-201ENST00000445117 448 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC079140.5-201ENST00000507882 310 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms