Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-224P-201ENST00000384055 107 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 SNORA48.2-201ENST00000390926 124 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL139397.2-201ENST00000404529 772 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 BTF3L4P3-201ENST00000418879 476 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 TIMM9P2-201ENST00000419324 266 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 USP9YP26-201ENST00000421008 661 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC097463.2-201ENST00000421074 142 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.33□□□□□ -2.2
VCX3BQ9H321 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 NANOGP2-201ENST00000435391 727 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL590365.1-201ENST00000450788 243 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 KATNBL1P6-201ENST00000453433 915 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL049873.1-201ENST00000480540 376 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC018868.1-201ENST00000491307 315 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 RPS15AP36-201ENST00000492022 382 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC024589.1-201ENST00000512207 263 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC021451.1-201ENST00000523498 1129 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC021739.1-201ENST00000559631 174 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL512347.1-201ENST00000566420 503 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 VN1R83P-201ENST00000595685 445 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 BNIP3P23-201ENST00000599655 511 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL355598.1-201ENST00000604169 202 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 MIR92B-201ENST00000607575 96 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC092953.2-201ENST00000608000 699 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC093673.2-201ENST00000609674 331 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC087241.4-201ENST00000612441 480 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 DUSP12P1-201ENST00000612874 516 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AL158163.2-201ENST00000619110 700 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AP000943.4-201ENST00000622912 357 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC104985.3-201ENST00000623479 597 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 AC079416.3-201ENST00000624479 549 ntBASIC1.33□□□□□ -2.2
VCX3BQ9H321 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.33□□□□□ -2.2
VCX3BQ9H321 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3BQ9H321 RNU6-1167P-201ENST00000363227 94 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 RNU4-51P-201ENST00000364206 140 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 RNU2-68P-201ENST00000410878 191 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 RNU2-72P-201ENST00000411175 163 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 RPL23AP76-201ENST00000441860 458 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 MTND2P31-201ENST00000512602 616 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 RNU6-250P-201ENST00000516958 103 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AK6P1-201ENST00000540219 478 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VCX3BQ9H321 ROCK1P1-201ENST00000573767 549 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC098826.3-201ENST00000603823 466 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 DPPA3P3-201ENST00000603842 430 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AL161798.1-201ENST00000604630 131 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 AC124016.2-201ENST00000610058 665 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.32□□□□□ -2.2
VCX3BQ9H321 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.32□□□□□ -2.2
VCX3BQ9H321 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VCX3BQ9H321 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC078974.1-201ENST00000411597 223 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AL953862.1-201ENST00000423016 168 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 HMGN2P3-201ENST00000433603 273 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 HMGN2P5-201ENST00000436882 273 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 FABP5P15-201ENST00000453566 214 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 FCF1P6-201ENST00000456841 595 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 MEMO1P3-201ENST00000459811 302 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC104564.1-201ENST00000493028 407 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 RNU6-390P-201ENST00000516259 103 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 AP003168.1-201ENST00000530091 307 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 EIF4BP1-201ENST00000554881 351 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC073544.2-201ENST00000601155 540 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC090186.1-201ENST00000605991 572 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC024060.1-201ENST00000607052 494 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms