Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AP000787.2-201ENST00000604432 568 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC080078.3-201ENST00000605407 463 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC123912.5-201ENST00000605470 343 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC008962.1-201ENST00000605729 304 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC106871.1-201ENST00000568324 3102 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 SNORA63-201ENST00000363450 132 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 Y_RNA.146-201ENST00000363549 102 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 RNU1-73P-201ENST00000383971 164 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 SNORD116-29-201ENST00000384516 83 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 U8.11-201ENST00000384699 133 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 U8.12-201ENST00000384701 133 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 RPL21P17-201ENST00000397467 475 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 MIR888-201ENST00000401186 77 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 HIGD1AP11-201ENST00000438361 280 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 MTATP6P7-201ENST00000453315 681 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 U8.18-201ENST00000459285 133 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC027575.1-201ENST00000481064 460 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC007991.1-201ENST00000522680 631 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 LINC00933-203ENST00000559812 219 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AL360157.1-201ENST00000565962 87 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AL627309.6-201ENST00000606857 840 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC064836.2-201ENST00000609491 462 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC039056.2-201ENST00000622261 511 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 Z69720.2-201ENST00000624755 279 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 AC006504.1-201ENST00000562493 3666 ntBASIC4.23□□□□□ -1.73
CCDC113Q9H0I3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNU6-933P-201ENST00000384424 107 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 SNORA3.3-201ENST00000408712 125 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RN7SKP156-201ENST00000410308 342 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RN7SKP202-201ENST00000410439 330 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNU6-954P-201ENST00000411355 107 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RPL26P27-201ENST00000414397 437 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 ATG3P1-201ENST00000419507 911 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AL590664.1-201ENST00000448065 339 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 PCMTD1P1-201ENST00000455560 355 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AC128713.1-201ENST00000471495 306 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNA5SP143-201ENST00000516936 115 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNU6-703P-201ENST00000516946 107 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 Y_RNA.708-201ENST00000516950 96 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 RNU6-1183P-201ENST00000517054 60 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 H3F3AP1-201ENST00000559984 334 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AC093249.1-201ENST00000567049 203 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 HMGB1P50-201ENST00000605814 607 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 MIR486-1-201ENST00000612171 68 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AL161423.1-201ENST00000613700 262 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 AL157817.1-201ENST00000614264 790 ntBASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC113Q9H0I3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL161912.2-201ENST00000565707 3007 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNA5SP124-201ENST00000362739 110 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 SNORD6-201ENST00000365444 73 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU6-1227P-201ENST00000383981 107 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU6-43P-201ENST00000384302 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms