Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SCARNA24.1-201ENST00000516465 137 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 RNA5SP471-201ENST00000516971 106 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 RNU6-410P-201ENST00000517006 107 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 AC005951.1-201ENST00000576706 485 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 AC087683.1-201ENST00000591187 441 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 AC005332.10-201ENST00000612725 619 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 U6.114-201ENST00000636407 96 ntBASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF541Q9H0D2 MTND5P29-201ENST00000458676 1807 ntBASIC3.03□□□□□ -1.93
ZNF541Q9H0D2 CR848007.1-201ENST00000442354 1699 ntBASIC3.03□□□□□ -1.93
ZNF541Q9H0D2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.03□□□□□ -1.93
ZNF541Q9H0D2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNU6-623P-201ENST00000363143 105 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNU6-181P-201ENST00000363225 107 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNU6-190P-201ENST00000384154 102 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AL359511.1-201ENST00000402970 211 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 BTF3P7-201ENST00000407097 488 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNA5SP111-201ENST00000411386 101 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 USP9YP6-201ENST00000413550 854 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC114491.1-201ENST00000416095 246 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 USP9YP20-201ENST00000419224 558 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 MED13P1-201ENST00000428342 171 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 DLGAP5P1-201ENST00000430307 464 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RPL36AP53-201ENST00000432891 316 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 BNIP3P2-201ENST00000441221 577 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC096638.1-201ENST00000444678 216 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RPL12P25-201ENST00000455592 494 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RN7SL283P-201ENST00000489055 303 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RPL39P36-201ENST00000490784 156 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNA5SP458-201ENST00000516188 119 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNA5SP281-201ENST00000516504 135 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 RNU6-445P-201ENST00000516949 107 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 MTCO2P4-201ENST00000517968 247 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 OR4R1P-201ENST00000529879 463 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 ADI1P3-201ENST00000549509 470 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC174048.1-201ENST00000603389 144 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC004805.2-201ENST00000605382 482 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AL365204.3-201ENST00000612448 685 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC130324.3-201ENST00000614165 542 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AC009509.4-201ENST00000619202 509 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 MIR7111-201ENST00000619751 72 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 AL137003.2-201ENST00000606924 2538 ntBASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ZNF541Q9H0D2 HSPA8P4-201ENST00000511877 1920 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC008264.2-201ENST00000610193 3731 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RPL9P7-201ENST00000330965 580 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNU4-24P-201ENST00000364565 139 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNU6-817P-201ENST00000391083 104 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNU2-68P-201ENST00000410878 191 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC099548.1-201ENST00000421443 426 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 HSPE1P1-201ENST00000421494 318 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL031667.1-201ENST00000440222 725 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC093392.2-201ENST00000450682 337 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 C1DP4-201ENST00000455429 424 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 HMGN2P23-201ENST00000456759 269 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC133134.1-201ENST00000466800 359 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNU6-405P-201ENST00000516637 110 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 RNA5SP165-201ENST00000517142 115 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL136363.2-201ENST00000604173 851 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL161798.1-201ENST00000604630 131 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL670379.4-201ENST00000605279 254 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AC046143.2-201ENST00000609789 160 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 Z99129.1-201ENST00000612510 255 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.01□□□□□ -1.93
ZNF541Q9H0D2 AL512643.1-201ENST00000635735 524 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms