Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NUTF2P8-201ENST00000604593 363 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 SNORA51-201ENST00000606420 132 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MTND5P10-201ENST00000603719 1809 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-395P-201ENST00000365662 106 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.422-201ENST00000384054 114 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.445-201ENST00000384168 102 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MIR491-201ENST00000384877 84 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MIR607-201ENST00000385241 96 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 SNORA75.4-201ENST00000391278 119 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AL158156.1-201ENST00000422509 473 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AL645568.3-201ENST00000433683 316 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 VDAC1P3-201ENST00000434069 851 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 NIPA2P5-201ENST00000452282 464 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 FABP5P15-201ENST00000453566 214 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MTCO3P10-201ENST00000455912 772 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AL163540.1-201ENST00000485382 386 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 HMGB1P30-201ENST00000492455 606 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 RNU1-54P-201ENST00000517181 120 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AP004242.1-201ENST00000533701 349 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 TRAV37-201ENST00000553906 342 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-85P-201ENST00000605989 107 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 MIR6500-201ENST00000622700 86 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 AC008568.2-201ENST00000623862 2313 ntBASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.5□□□□□ -1.85
AMBRA1Q9C0C7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 SNORD62.1-201ENST00000362541 86 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 SNORD3E-201ENST00000362899 217 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNA5SP189-201ENST00000364920 115 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-213P-201ENST00000384051 104 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNU2-3P-201ENST00000410144 191 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RPL31P12-201ENST00000422587 358 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AL590383.1-201ENST00000428602 75 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC007919.1-201ENST00000429380 217 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 HMGB1P9-201ENST00000429856 646 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC097473.1-201ENST00000508142 408 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-327P-201ENST00000516270 127 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNA5SP309-201ENST00000516670 106 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1016P-201ENST00000516689 94 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNA5SP290-201ENST00000517133 127 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RNA5SP291-201ENST00000517222 105 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RN7SL703P-201ENST00000578485 302 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 KLKP1-201ENST00000595979 403 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AL360085.1-201ENST00000604713 532 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC106900.2-201ENST00000604994 317 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC005344.1-201ENST00000613391 459 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC133104.2-201ENST00000615272 193 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 PISRT1.1-201ENST00000616930 107 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC244517.12-201ENST00000623581 663 ntBASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AMBRA1Q9C0C7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 MTND5P19-201ENST00000424872 1794 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-600P-201ENST00000362524 99 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms