Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MIR1302-6-201ENST00000408466 90 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 HMGB1P9-201ENST00000429856 646 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 PCMTD1P1-201ENST00000455560 355 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-1132P-201ENST00000459214 107 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RPL9P32-201ENST00000464118 620 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU2-27P-201ENST00000516185 142 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RN7SKP258-201ENST00000517151 304 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AC023157.2-201ENST00000540596 141 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 MIR4513-201ENST00000581077 86 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AC098479.1-201ENST00000609225 154 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 MIR7851-201ENST00000610611 160 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AC107027.3-201ENST00000565095 3473 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AL356274.2-201ENST00000624379 3752 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 OR56A5-201ENST00000340110 738 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-989P-201ENST00000362756 107 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.314-201ENST00000365114 102 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-472P-201ENST00000384299 107 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.551-201ENST00000384661 102 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 MIR517A-201ENST00000385001 87 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 RNA5SP296-201ENST00000410523 111 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC069285.2-201ENST00000440210 275 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 DAP3P1-201ENST00000441522 278 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC114801.2-201ENST00000503825 781 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 SNORA31.3-201ENST00000516029 96 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 RNU7-4P-201ENST00000516961 62 ntBASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP4Q9C0A0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP4Q9C0A0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC027290.2-201ENST00000623210 18662 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC008669.1-201ENST00000565823 2178 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-774P-201ENST00000363238 107 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-14P-201ENST00000384630 106 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AL138885.1-201ENST00000405921 675 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-174P-201ENST00000410406 106 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC092447.6-201ENST00000414578 210 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC017083.1-201ENST00000428093 483 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC004866.2-201ENST00000438285 481 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 SNORD127-201ENST00000458892 86 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RPL21P41-201ENST00000459863 264 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-120P-201ENST00000516077 103 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 OR4H12P-201ENST00000556269 907 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 IGHV3-29-201ENST00000604817 344 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 MIR4272-201ENST00000635924 64 ntBASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTNAP4Q9C0A0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 AC005183.1-201ENST00000603687 1979 ntBASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 Y_RNA.515-201ENST00000384535 112 ntBASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 MIR128-1-201ENST00000384921 82 ntBASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 AC090774.1-201ENST00000435925 246 ntBASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.64□□□□□ -1.67
CNTNAP4Q9C0A0 AC133473.1-201ENST00000455173 299 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms