Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 AC110994.2-201ENST00000635481 492 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM9Q9C026 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM9Q9C026 SNORD56.2-201ENST00000363242 71 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 RNU6-288P-201ENST00000363690 104 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 Y_RNA.245-201ENST00000364493 95 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 RNU5E-6P-201ENST00000365574 115 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 SMIM11P1-201ENST00000369586 178 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC127391.1-201ENST00000411737 98 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 ELOCP4-201ENST00000420090 333 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 ISCA1P6-201ENST00000427740 390 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC009961.3-201ENST00000449832 765 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 SNRPFP4-201ENST00000456366 242 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 RPL26P9-201ENST00000457466 433 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 SNORD97-201ENST00000459187 142 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 SUMO2P6-201ENST00000505273 288 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 RNU2-10P-201ENST00000516375 211 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 RNU6-1220P-201ENST00000517126 108 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 AP002453.2-201ENST00000533503 320 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 GLYCAM1-201ENST00000546596 285 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 HMGN2P15-201ENST00000585707 270 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC119751.7-201ENST00000600494 245 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC007938.3-201ENST00000604965 623 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 MTND4LP5-201ENST00000605152 292 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AL133173.2-201ENST00000614270 90 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 AC108479.2-201ENST00000617314 601 ntBASIC2.51□□□□□ -2.01
TRIM9Q9C026 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM9Q9C026 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM9Q9C026 U8.2-201ENST00000363156 134 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RN7SKP226-201ENST00000364912 300 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RNU6-39P-201ENST00000384344 107 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RPL23AP32-201ENST00000395315 459 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RPS3AP36-201ENST00000398190 775 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RNU4-53P-201ENST00000410828 140 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC104651.1-201ENST00000427559 735 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 HMGB1P27-201ENST00000431429 603 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 GAPDHP17-201ENST00000449858 1001 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 snoU109.1-201ENST00000459339 135 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 SNORA31.3-201ENST00000516029 96 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 RNU6-1092P-201ENST00000516955 87 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC011979.2-201ENST00000527568 352 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC073544.2-201ENST00000601155 540 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.6-201ENST00000603753 252 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.11-201ENST00000604059 253 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL161798.1-201ENST00000604630 131 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC008162.1-201ENST00000604718 254 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.1-201ENST00000604752 252 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.5-201ENST00000605253 252 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.12-201ENST00000605291 253 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.8-201ENST00000605353 252 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AC004805.2-201ENST00000605382 482 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 AL670379.7-201ENST00000605823 252 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM9Q9C026 FO624990.1-201ENST00000636373 85 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM9Q9C026 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM9Q9C026 TEX21P-201ENST00000447107 1476 ntBASIC2.5□□□□□ -2.01
TRIM9Q9C026 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 Y_RNA.201-201ENST00000364052 96 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 RNU4-91P-201ENST00000364778 135 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 SNORD116-1-201ENST00000384335 95 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 AF274854.1-201ENST00000413236 615 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 Z98742.3-201ENST00000418637 326 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 ZNF90P2-204ENST00000419323 1075 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 ELOCP14-201ENST00000428070 331 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 HMGB1P9-201ENST00000429856 646 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM9Q9C026 MTCO2P16-201ENST00000436962 677 ntBASIC2.49□□□□□ -2.01
TRIM9Q9C026 HMGB3P12-201ENST00000438745 556 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms