Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU7-167P-201ENST00000459160 62 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AL133162.1-201ENST00000463228 453 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RN7SL542P-201ENST00000467147 294 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RPL23AP55-201ENST00000498163 452 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC092436.3-201ENST00000511788 257 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-789P-201ENST00000517105 102 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC023632.4-201ENST00000517783 191 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC040926.1-201ENST00000530195 238 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RANP3-201ENST00000530970 276 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC026371.1-201ENST00000551867 419 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC012433.1-201ENST00000588916 398 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC110741.2-201ENST00000605278 268 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 MTND5P6-201ENST00000422338 1798 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.105-201ENST00000363182 111 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.152-201ENST00000363578 100 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.462-201ENST00000384268 102 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.515-201ENST00000384535 112 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 U3.29-201ENST00000391296 212 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNA5SP111-201ENST00000411386 101 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AL590135.1-201ENST00000422215 156 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 BX276092.3-201ENST00000424182 230 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 HMGN2P21-201ENST00000447764 270 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AL133547.1-201ENST00000448546 220 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 PRELID3BP1-201ENST00000457142 540 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC022034.3-201ENST00000471393 478 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 HMGN1P11-201ENST00000508668 303 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC016065.2-201ENST00000514530 444 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-475P-201ENST00000516073 104 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-27P-201ENST00000516146 107 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 SCARNA14-201ENST00000516903 136 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-352P-201ENST00000516908 107 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU4-60P-201ENST00000517239 135 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC022080.3-201ENST00000544433 482 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC092470.1-201ENST00000546187 132 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 AC090517.1-201ENST00000569307 266 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 Z98751.3-201ENST00000604447 521 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 SDR42E1P4-201ENST00000620894 481 ntBASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP1Q96SZ6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDK5RAP1Q96SZ6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CDK5RAP1Q96SZ6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-212P-201ENST00000362642 104 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORD27-201ENST00000363981 72 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-128P-201ENST00000383976 107 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-701P-201ENST00000384059 107 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-432P-201ENST00000384196 109 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.562-201ENST00000384695 113 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-1093P-201ENST00000391194 107 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 PTMAP2-201ENST00000397627 327 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU2-14P-201ENST00000411053 191 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AL445584.1-201ENST00000431451 330 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RPS3AP12-201ENST00000443616 753 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL29P29-201ENST00000448725 423 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC007967.1-201ENST00000455422 1159 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU7-169P-201ENST00000459456 61 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL37P6-202ENST00000464216 403 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL39P38-201ENST00000467018 153 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC096745.1-201ENST00000509945 370 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 MTCO3P44-201ENST00000510977 541 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AP004242.1-201ENST00000533701 349 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 SETP7-201ENST00000552169 453 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC109446.1-201ENST00000566172 220 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AL031176.1-201ENST00000604554 466 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AL137849.1-201ENST00000604767 169 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms