Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC112492.4-201ENST00000456549 352 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AL121594.1-201ENST00000475906 575 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC132942.1-201ENST00000486753 483 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC116337.1-201ENST00000509680 687 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 RNU6-703P-201ENST00000516946 107 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 RPL21P5-201ENST00000554662 472 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 MIR4513-201ENST00000581077 86 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AL139344.1-201ENST00000605228 195 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC010133.1-201ENST00000615809 842 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC138627.2-201ENST00000624202 601 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.9□□□□□ -2.27
AP1S3Q96PC3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 Y_RNA.245-201ENST00000364493 95 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RNU6-481P-201ENST00000384194 107 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RPL23AP36-201ENST00000413895 458 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 TAF13P2-201ENST00000416876 286 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 MTATP6P30-201ENST00000443540 664 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RPL39P6-201ENST00000448289 150 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC004223.1-201ENST00000479840 271 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RPL21P47-201ENST00000483696 477 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC091917.2-201ENST00000505002 744 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC117522.2-201ENST00000510049 657 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 PSMA3P-201ENST00000555485 635 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 ZNF971P-201ENST00000562068 1249 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 AC012414.6-201ENST00000568241 401 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 CLIC4P2-201ENST00000601934 717 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RBBP8P1-201ENST00000449447 1844 ntBASIC0.89□□□□□ -2.27
AP1S3Q96PC3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
AP1S3Q96PC3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 RNU6-343P-201ENST00000364709 104 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 SUGT1P1-201ENST00000379514 476 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 SNORA48.1-201ENST00000390879 135 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 SNORA40.6-201ENST00000391153 128 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 BTF3L4P3-201ENST00000418879 476 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL591704.2-201ENST00000421658 181 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 MTCO1P44-201ENST00000441935 243 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 snoU13.9-201ENST00000458927 103 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC139453.3-201ENST00000493276 369 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 RRN3P3-201ENST00000549207 578 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 AF131215.7-201ENST00000602443 707 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 HSPE1P19-201ENST00000603327 295 ntBASIC0.88□□□□□ -2.27
AP1S3Q96PC3 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.88□□□□□ -2.27
AP1S3Q96PC3 SNRPEP3-201ENST00000338402 276 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RNU1-58P-201ENST00000362413 163 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RNU5E-1-201ENST00000362477 120 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 Y_RNA.111-201ENST00000363248 100 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 SNORD14D-201ENST00000384390 87 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 TPMTP3-201ENST00000411928 735 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 OR51A5P-201ENST00000415429 942 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 HMGB1P31-201ENST00000437242 427 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms