Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 SNORD50.1-201ENST00000362987 71 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP22-201ENST00000365393 109 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP167-201ENST00000365461 116 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNU6-166P-201ENST00000384371 107 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.592-201ENST00000410274 109 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP494-201ENST00000410653 129 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RPS6P12-201ENST00000432491 726 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC013470.1-201ENST00000453438 462 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RN7SL860P-201ENST00000473738 223 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RPL30P10-201ENST00000488148 337 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNU6-572P-201ENST00000516724 80 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNU6-612P-201ENST00000516909 102 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RNU6-897P-201ENST00000517135 105 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC109329.1-201ENST00000518744 317 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 TVP23BP1-201ENST00000557500 617 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 RPL23AP97-201ENST00000568955 471 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 MIR3138-201ENST00000585238 82 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AL139395.1-201ENST00000603662 160 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC008962.1-201ENST00000605729 304 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AL138721.1-201ENST00000616756 179 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 AC130454.1-201ENST00000622948 401 ntBASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AL359693.1-201ENST00000614959 2407 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 RNU6-428P-201ENST00000362942 107 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 U3.6-201ENST00000363622 211 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 RNU1-132P-201ENST00000364300 164 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.471-201ENST00000384312 102 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 MIR1911-201ENST00000410783 80 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 RNU2-68P-201ENST00000410878 191 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 RPL23AP26-201ENST00000412728 464 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AL078601.1-201ENST00000444542 271 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 HMGN2P21-201ENST00000447764 270 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 ANP32BP2-201ENST00000454525 545 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC092798.1-201ENST00000458542 409 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AP000873.1-201ENST00000463987 400 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC100770.1-201ENST00000532310 322 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 TRAV8-5-201ENST00000537369 341 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 MIR3128-201ENST00000581957 66 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 MIR3939-201ENST00000582614 106 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AC083809.1-201ENST00000615051 472 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 MIR6810-201ENST00000622701 70 ntBASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCHD1Q96NR3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP366-201ENST00000365454 123 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 RNU2-38P-201ENST00000410856 79 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 NUTF2P3-201ENST00000448540 384 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 RN7SL385P-201ENST00000468873 276 ntBASIC4.04□□□□□ -1.76
PTCHD1Q96NR3 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms