Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-72P-201ENST00000384285 79 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL513475.1-201ENST00000406602 315 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 BTF3P7-201ENST00000407097 488 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 CYCSP33-201ENST00000414485 327 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL513043.1-201ENST00000439124 535 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 SNORD105B-201ENST00000458770 79 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 RNU7-180P-201ENST00000459240 63 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 snoU109.2-201ENST00000459316 135 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 MTAPP1-201ENST00000489154 819 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 RNU6-314P-201ENST00000516574 104 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC106782.4-201ENST00000568264 210 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 VN1R85P-201ENST00000601587 426 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL020997.2-201ENST00000602607 184 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL137843.1-201ENST00000605078 385 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AF250324.2-201ENST00000608299 610 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC093788.1-201ENST00000609356 927 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC010378.1-201ENST00000619270 362 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL031601.2-202ENST00000622650 282 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 CR381653.2-201ENST00000624041 768 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AC022418.1-201ENST00000624118 445 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AL049781.1-201ENST00000623195 3585 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 SNORA69-201ENST00000383895 132 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 RNU6-748P-201ENST00000384648 107 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 MIR181A1-201ENST00000385026 110 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 SNORA16.2-201ENST00000390991 127 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 RAP1BP3-201ENST00000407180 549 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC245054.2-201ENST00000415639 319 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 PGBD4P6-201ENST00000421501 610 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC097713.2-201ENST00000430199 356 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC026402.1-201ENST00000513642 170 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 RNU2-69P-201ENST00000516061 100 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC016957.1-201ENST00000534895 309 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 BNIP3P6-201ENST00000549284 499 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 MTCO3P23-201ENST00000561363 289 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 HMGB1P33-201ENST00000563485 527 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC006130.2-201ENST00000586202 326 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC011890.2-201ENST00000613393 294 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 U4.6-201ENST00000621618 127 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AC068724.3-201ENST00000625906 87 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 RNA5SP196-201ENST00000625967 102 ntBASIC2.86□□□□□ -1.95
CMTM3Q96MX0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CMTM3Q96MX0 SNORD9-201ENST00000362566 104 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.399-201ENST00000383955 105 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 MIR147B-201ENST00000390185 80 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms