Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SPG11Q96JI7 RNU1-72P-201ENST00000362976 153 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.32□□□□□ -2.36
SPG11Q96JI7 SEPT2P1-201ENST00000419651 180 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AL035410.1-201ENST00000427409 427 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 RPL37P21-201ENST00000435890 276 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AL590365.1-201ENST00000450788 243 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.32□□□□□ -2.36
SPG11Q96JI7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPG11Q96JI7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPG11Q96JI7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.32□□□□□ -2.36
SPG11Q96JI7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.32□□□□□ -2.36
SPG11Q96JI7 MTCYBP41-201ENST00000528913 1123 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 MTND2P17-201ENST00000550281 688 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 MIR3616-201ENST00000584070 92 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AL355812.1-201ENST00000603215 216 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AC145207.9-201ENST00000623802 325 ntBASIC0.32□□□□□ -2.36
SPG11Q96JI7 AL138880.1-201ENST00000405824 642 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.31□□□□□ -2.36
SPG11Q96JI7 MTND4P6-201ENST00000438297 472 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 NF1P3-201ENST00000457709 450 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 AC112518.2-201ENST00000508565 425 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 AC004062.1-201ENST00000509926 645 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.31□□□□□ -2.36
SPG11Q96JI7 RNU5F-8P-201ENST00000515941 111 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.31□□□□□ -2.36
SPG11Q96JI7 RRN3P3-201ENST00000549207 578 ntBASIC0.31□□□□□ -2.36
SPG11Q96JI7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
SPG11Q96JI7 SNORD3E-201ENST00000362899 217 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 RPS3AP24-201ENST00000407896 734 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC098592.2-201ENST00000413158 265 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 EDDM3CP-201ENST00000415977 425 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC013410.2-201ENST00000422627 201 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 TPTE2P6-202ENST00000445572 1007 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 SNORA48.10-201ENST00000516965 160 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC006518.2-201ENST00000542513 940 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 MTCO2P22-201ENST00000603246 681 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 HSBP1P2-201ENST00000299671 229 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 RNU4-78P-201ENST00000410940 126 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC087879.1-201ENST00000474343 374 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 RN7SKP277-201ENST00000516895 283 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
SPG11Q96JI7 MTND2P13-201ENST00000577438 1039 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.3□□□□□ -2.36
SPG11Q96JI7 PRR13P7-201ENST00000605538 430 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 AC018755.4-201ENST00000619715 454 ntBASIC0.3□□□□□ -2.36
SPG11Q96JI7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SPG11Q96JI7 RNU6-989P-201ENST00000362756 107 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RNU1-105P-201ENST00000363470 161 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 U3.13-201ENST00000364804 214 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RNU6-46P-201ENST00000383860 107 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 Y_RNA.468-201ENST00000384298 102 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RNU6-939P-201ENST00000384634 107 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 MIR224-201ENST00000384889 81 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 RPS3AP37-201ENST00000419176 745 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 Z82190.1-201ENST00000454534 490 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC090616.5-202ENST00000582111 297 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC069304.3-201ENST00000603938 1084 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC068880.5-201ENST00000624331 290 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RNA5SP105-201ENST00000391123 113 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RN7SKP158-201ENST00000410453 326 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 RPL21P32-201ENST00000419877 477 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AL109913.1-201ENST00000421173 514 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 AGGF1P5-201ENST00000567900 919 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC012414.6-201ENST00000568241 401 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.29□□□□□ -2.36
SPG11Q96JI7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC090132.2-201ENST00000615881 347 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AL121890.5-201ENST00000620848 304 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AP002791.1-201ENST00000623291 381 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 AC006963.1-201ENST00000624003 1052 ntBASIC0.29□□□□□ -2.36
SPG11Q96JI7 SNORA25.8-201ENST00000364831 128 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 RPL30P11-201ENST00000495304 339 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 AP004371.1-201ENST00000525240 214 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AL158211.1-201ENST00000566763 763 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms