Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 NDUFS5P6-201ENST00000529136 295 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC011260.1-201ENST00000578420 472 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TTC28Q96AY4 SNORA38-201ENST00000363946 132 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 RNU6-339P-201ENST00000384310 107 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 RNU6-1151P-201ENST00000384684 107 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC073614.1-201ENST00000438690 650 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AL500527.1-201ENST00000448532 255 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC104692.1-201ENST00000472406 90 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 RNU6-928P-201ENST00000516876 104 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC074051.3-201ENST00000570238 358 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AL669831.4-202ENST00000590817 238 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 RSL24D1P11-201ENST00000591045 491 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AL450336.1-201ENST00000605180 586 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 MIR7157-201ENST00000635801 60 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 MTCO1P23-201ENST00000415223 1526 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 Y_RNA.352-201ENST00000365439 102 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-441P-201ENST00000384545 106 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR649-201ENST00000384843 97 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-220P-201ENST00000390919 107 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RN7SKP158-201ENST00000410453 326 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-1328P-201ENST00000410938 106 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-272P-201ENST00000411028 104 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 VPS26BP1-201ENST00000417155 755 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC092648.1-201ENST00000425870 423 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 RPS15AP5-201ENST00000436276 388 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC004383.1-201ENST00000438135 289 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 Z82190.1-201ENST00000454534 490 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 snoU109.1-201ENST00000459339 135 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 CABYRP1-201ENST00000465493 1045 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 OR8K4P-201ENST00000534608 872 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC106052.1-201ENST00000608029 497 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC091304.6-201ENST00000619761 202 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AP003400.6-201ENST00000624698 740 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU4-23P-201ENST00000362839 140 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-270P-201ENST00000364131 105 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNA5SP368-201ENST00000364298 116 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 SNORA16B-201ENST00000364674 135 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-1083P-201ENST00000384022 107 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNA5SP299-201ENST00000391203 116 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL355497.1-201ENST00000406262 551 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL035410.1-201ENST00000427409 427 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL356867.1-201ENST00000429623 299 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL606489.2-201ENST00000433886 234 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 HMGN2P10-201ENST00000448085 265 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 OR52A4P-202ENST00000481634 799 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 KLRA1P-201ENST00000503499 986 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU6-1282P-201ENST00000516735 96 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 RNU2-44P-201ENST00000516795 194 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC022616.2-201ENST00000523185 300 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC010186.2-204ENST00000537668 439 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.7□□□□□ -2.3
TTC28Q96AY4 LINC00933-203ENST00000559812 219 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR5571-201ENST00000577998 113 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AL021997.1-201ENST00000605757 193 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR6718-201ENST00000616153 80 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC091925.2-201ENST00000625059 256 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 MTND2P41-201ENST00000637599 773 ntBASIC0.7□□□□□ -2.3
TTC28Q96AY4 AC008555.8-201ENST00000623602 2168 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TTC28Q96AY4 SNORA3A-201ENST00000364113 130 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 RNU6-819P-201ENST00000364116 107 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AL356379.1-201ENST00000414105 126 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 HMGN3P1-201ENST00000453847 193 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC015688.2-201ENST00000584523 262 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms