Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPS15AP34-201ENST00000487776 387 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC026427.2-201ENST00000506228 536 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC098591.2-201ENST00000510152 315 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC108078.2-201ENST00000510750 236 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 MRPS36P2-201ENST00000512569 299 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 RNU6-410P-201ENST00000517006 107 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AK6P1-201ENST00000540219 478 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 GLYCAM1-201ENST00000546596 285 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC245389.1-201ENST00000605141 529 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC007318.2-201ENST00000620999 243 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC018692.3-201ENST00000623929 123 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFT1Q96AA3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 RNU6-108P-201ENST00000365558 107 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFT1Q96AA3 MIR183-201ENST00000384958 110 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 SNORD115-47-201ENST00000391226 86 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 CALM2P3-201ENST00000400429 449 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 RPL31P35-201ENST00000431058 377 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AL451074.3-201ENST00000437709 472 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC079781.2-201ENST00000446424 169 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 FGF7P6-202ENST00000451282 293 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC091153.1-201ENST00000466297 402 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC126389.1-201ENST00000477436 290 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC116353.2-201ENST00000505332 712 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 SNORA67.7-201ENST00000516664 135 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 RN7SKP40-201ENST00000517211 242 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC021739.1-201ENST00000559631 174 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 MIR1273C-201ENST00000578669 77 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AL121992.2-201ENST00000606262 256 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC136475.10-201ENST00000620253 385 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 AC010338.1-201ENST00000621823 717 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RFT1Q96AA3 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.59□□□□□ -1.99
RFT1Q96AA3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.59□□□□□ -2
RFT1Q96AA3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.58□□□□□ -2
RFT1Q96AA3 AC073325.2-201ENST00000339545 159 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.58□□□□□ -2
RFT1Q96AA3 RNU6-1097P-201ENST00000363586 107 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 SNORA68.1-201ENST00000364537 132 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RNU6-61P-201ENST00000365528 109 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RNU6-1042P-201ENST00000384204 107 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 SNORA7.4-201ENST00000384249 137 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 BTF3P7-201ENST00000407097 488 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 AC005326.1-201ENST00000429197 123 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MTND1P2-201ENST00000430604 821 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 GPR143P-201ENST00000434155 205 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RPS20P5-201ENST00000434808 360 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC006028.1-201ENST00000438379 402 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 FABP5P13-201ENST00000452144 328 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RPL27AP5-201ENST00000469428 449 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 TRBV1-201ENST00000476502 284 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RPS29P2-201ENST00000479278 136 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 RPS3AP14-201ENST00000483907 780 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC108078.1-201ENST00000508073 725 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 SNORD19.2-201ENST00000516978 73 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RN7SKP272-201ENST00000516988 232 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.58□□□□□ -2
RFT1Q96AA3 AP001646.1-201ENST00000527936 915 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.58□□□□□ -2
RFT1Q96AA3 AC006199.1-201ENST00000548728 219 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms