Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF1Q92994 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF1Q92994 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF1Q92994 AC113195.1-201ENST00000579952 141 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AC093227.2-201ENST00000589357 285 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.39□□□□□ -1.71
BRF1Q92994 AC098826.3-201ENST00000603823 466 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF1Q92994 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
BRF1Q92994 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
BRF1Q92994 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRF1Q92994 AC116096.1-201ENST00000566804 2314 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRF1Q92994 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRF1Q92994 Y_RNA.153-201ENST00000363615 91 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 RNU6-512P-201ENST00000364438 103 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 RN7SKP227-201ENST00000364445 330 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 RNU6-395P-201ENST00000365662 106 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
BRF1Q92994 RNU6-174P-201ENST00000410406 106 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AL030996.1-201ENST00000411430 235 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF1Q92994 RPS15AP6-201ENST00000420703 385 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF1Q92994 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF1Q92994 AL133396.1-201ENST00000432048 687 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 DAP3P1-201ENST00000441522 278 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC010285.1-201ENST00000470580 392 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 RPS20P22-201ENST00000473700 357 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 MIR2114-201ENST00000516645 80 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC104576.1-201ENST00000524225 88 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 ATP5F1P5-201ENST00000526403 760 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF1Q92994 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF1Q92994 AL161670.1-201ENST00000554348 137 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC002545.1-201ENST00000592511 181 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AC092447.9-201ENST00000603395 144 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AL161798.1-201ENST00000604630 131 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 AL160281.1-201ENST00000605307 311 ntBASIC4.38□□□□□ -1.71
BRF1Q92994 OR4G2P-202ENST00000641004 1759 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRF1Q92994 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
BRF1Q92994 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRF1Q92994 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRF1Q92994 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRF1Q92994 RNA5SP479-201ENST00000364858 117 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 RNU6-1179P-201ENST00000384667 107 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 SNORD73A-201ENST00000386062 65 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AL445529.1-201ENST00000398713 389 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 MIR1290-201ENST00000408735 78 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC096664.2-201ENST00000411843 406 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 NDUFB4P7-201ENST00000423198 363 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF1Q92994 RPL23AP50-201ENST00000434149 455 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC008571.1-201ENST00000467232 300 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 RPS23P3-201ENST00000470993 430 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AL049874.1-201ENST00000489560 388 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 RNU1-86P-201ENST00000516108 154 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 MIR892C-201ENST00000516410 77 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 RNU1-107P-201ENST00000516617 154 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC007991.1-201ENST00000522680 631 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC084851.1-201ENST00000529105 249 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AP002404.1-201ENST00000532005 451 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 TRAV37-201ENST00000553906 342 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC110588.1-201ENST00000559699 137 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 HSPE1P5-201ENST00000561489 272 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 AC109446.1-201ENST00000566172 220 ntBASIC4.37□□□□□ -1.71
BRF1Q92994 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BRF1Q92994 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
BRF1Q92994 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
BRF1Q92994 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRF1Q92994 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
BRF1Q92994 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
BRF1Q92994 RNU6-1181P-201ENST00000384191 106 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 RNU2-23P-201ENST00000410545 195 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 Y_RNA.618-201ENST00000410949 107 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BRF1Q92994 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.36□□□□□ -1.71
BRF1Q92994 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.36□□□□□ -1.71
BRF1Q92994 AC011005.2-201ENST00000487324 359 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 AL359273.1-201ENST00000510918 627 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 RNU4-77P-201ENST00000516692 156 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 RNU6-794P-201ENST00000517261 64 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BRF1Q92994 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.36□□□□□ -1.71
BRF1Q92994 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 MIR5685-201ENST00000579080 79 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.36□□□□□ -1.71
BRF1Q92994 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.36□□□□□ -1.71
BRF1Q92994 RNU1-30P-201ENST00000606575 163 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms