Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RNU6-562P-201ENST00000362731 107 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 SNORA63-201ENST00000363450 132 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RNU6-395P-201ENST00000365662 106 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 SKA2P1-201ENST00000425592 390 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC007919.1-201ENST00000429380 217 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 CYCSP4-201ENST00000429682 331 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 FABP5P14-201ENST00000437273 393 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 SNRPGP5-201ENST00000456003 220 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RPS27P27-201ENST00000498779 255 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RN7SKP18-201ENST00000516005 275 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 RNA5SP290-201ENST00000517133 127 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC087854.1-201ENST00000519706 414 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 AL031601.2-202ENST00000622650 282 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 MTND4LP32-201ENST00000636111 270 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4AQ8WYN0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC066616.2-201ENST00000559334 1481 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RNY4P36-201ENST00000391116 96 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RNU6-370P-201ENST00000411008 104 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RNU6-607P-201ENST00000411283 108 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RNU2-71P-201ENST00000411395 189 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AL353621.1-201ENST00000418219 243 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 GPM6BP2-201ENST00000432046 144 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AL359672.1-201ENST00000442302 409 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC009237.8-201ENST00000445492 379 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 GPM6BP1-201ENST00000446387 144 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AL118496.2-201ENST00000448300 230 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 SNORD105B-201ENST00000458770 79 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RPL23AP14-201ENST00000468281 468 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC104472.2-201ENST00000469035 601 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC022493.1-201ENST00000492984 337 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RNA5SP291-201ENST00000517222 105 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC069113.1-201ENST00000517763 267 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC104027.1-201ENST00000521887 300 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 OR5D17P-201ENST00000531492 978 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AC093249.1-201ENST00000567049 203 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4AQ8WYN0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 MIR134-201ENST00000385258 73 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 MTCYBP4-201ENST00000401524 249 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 CYCSP19-201ENST00000411715 316 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AL158156.1-201ENST00000422509 473 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 RPL7P37-201ENST00000425095 738 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 MTCYBP6-201ENST00000441810 138 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 PIGFP3-201ENST00000441918 722 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 RNU7-138P-201ENST00000459479 64 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 KC877373.1-201ENST00000479066 408 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 HMGB1P30-201ENST00000492455 606 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC026801.1-201ENST00000497178 464 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms