Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RNA5SP230-201ENST00000517039 122 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 SNORA31.23-201ENST00000517219 133 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 AC093331.1-201ENST00000521474 169 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 MIR4443-201ENST00000585052 53 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 OR7E18P-201ENST00000592589 702 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 AP005432.1-201ENST00000580891 3485 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCD2Q8WV60 SMG1P4-204ENST00000523028 4131 ntBASIC5.55□□□□□ -1.52
PTCD2Q8WV60 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AL596211.1-201ENST00000569873 2277 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 SNORD114-19-201ENST00000363072 75 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 SNORD45.3-201ENST00000363836 72 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RNU6-1336P-201ENST00000383886 109 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 U1.1-201ENST00000384101 164 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RNU6-905P-201ENST00000384434 107 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 MIR208B-201ENST00000401172 77 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RPS11P7-201ENST00000442125 465 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RN7SL177P-201ENST00000476596 299 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RN7SL547P-201ENST00000490793 290 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RNU6-513P-201ENST00000516104 104 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RNU6-412P-201ENST00000516434 106 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 RNU4-60P-201ENST00000517239 135 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC069528.2-201ENST00000624849 1991 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AP001029.2-203ENST00000589795 4910 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD2Q8WV60 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.54□□□□□ -1.52
PTCD2Q8WV60 AC104964.3-201ENST00000606115 2860 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 AC092376.2-201ENST00000622621 4116 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 FTH1P15-201ENST00000406984 280 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 HSPE1P21-201ENST00000438283 308 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 SNORA31.16-201ENST00000516773 139 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 CKS1BP7-201ENST00000522230 235 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 IGKV2-18-201ENST00000522607 343 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 AP004371.1-201ENST00000525240 214 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 MIR6826-201ENST00000617808 98 ntBASIC5.53□□□□□ -1.52
PTCD2Q8WV60 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD2Q8WV60 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 Y_RNA.243-201ENST00000364481 109 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 RNU6-629P-201ENST00000384061 103 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 SNORA16A-201ENST00000384342 137 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 RNU6-106P-201ENST00000384405 107 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 OR2AH1P-201ENST00000425717 928 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.52□□□□□ -1.53
PTCD2Q8WV60 RPL37P4-201ENST00000448908 268 ntBASIC5.52□□□□□ -1.53
PTCD2Q8WV60 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms