Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU2-3P-201ENST00000410144 191 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 RNA5SP293-201ENST00000410527 113 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AC005534.2-201ENST00000431047 433 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AC009237.8-201ENST00000445492 379 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 U3.44-201ENST00000458938 192 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 RPS27P27-201ENST00000498779 255 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 RPL39P5-202ENST00000512505 151 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 RNU2-27P-201ENST00000516185 142 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 RNU6-323P-201ENST00000521915 107 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AP005597.4-201ENST00000526762 229 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 TRAV28-201ENST00000557548 323 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AC087499.8-201ENST00000578406 226 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AC002044.1-201ENST00000606707 158 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 AL031601.2-202ENST00000622650 282 ntBASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
CCHCR1Q8TD31 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CCHCR1Q8TD31 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNU6-562P-201ENST00000362731 107 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 Y_RNA.126-201ENST00000363382 111 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNU6-395P-201ENST00000365662 106 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 CYCSP33-201ENST00000414485 327 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 ATG3P1-201ENST00000419507 911 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 MTCO2P27-201ENST00000420740 428 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AL158156.1-201ENST00000422509 473 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RPL7P37-201ENST00000425095 738 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AL158071.1-201ENST00000430315 461 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 MYL8P-204ENST00000431574 518 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 GPM6BP2-201ENST00000432046 144 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 GPM6BP1-201ENST00000446387 144 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNU7-152P-201ENST00000458982 64 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RPL21P104-201ENST00000464143 478 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC110768.1-201ENST00000509222 400 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNA5SP468-201ENST00000516782 93 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RNA5SP290-201ENST00000517133 127 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC100830.2-201ENST00000581636 240 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 MIR5187-201ENST00000583479 76 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AL355365.1-201ENST00000616480 294 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 RMST_4.1-201ENST00000616886 107 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 SNORD39.4-201ENST00000620099 78 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AL359693.1-201ENST00000614959 2407 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 AC007785.2-201ENST00000598627 1916 ntBASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCHCR1Q8TD31 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 Y_RNA.33-201ENST00000362591 102 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 SNORA75B-201ENST00000384053 137 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 Y_RNA.482-201ENST00000384377 111 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 CRYBB2P1-203ENST00000415709 538 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 MTCO2P12-201ENST00000427426 682 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC007919.1-201ENST00000429380 217 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AL359672.1-201ENST00000442302 409 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 RN7SL442P-201ENST00000473804 320 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 HMGN1P11-201ENST00000508668 303 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 RNU6-1332P-201ENST00000516666 104 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 RNA5SP291-201ENST00000517222 105 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 SYF2P1-201ENST00000550658 413 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AL163153.1-201ENST00000554223 283 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC099778.2-201ENST00000610904 211 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AC098657.3-201ENST00000620434 263 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 MTND4LP32-201ENST00000636111 270 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 AL513302.2-201ENST00000562313 1842 ntBASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.76□□□□□ -1.81
CCHCR1Q8TD31 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.75□□□□□ -1.81
CCHCR1Q8TD31 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 414.7 ms