Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZIC4Q8N9L1 RNU6-1280P-201ENST00000365211 107 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 SNORA40.4-201ENST00000390971 128 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 SNORA26.9-201ENST00000391322 122 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AL136310.1-201ENST00000404926 654 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 NDUFS5P1-201ENST00000405668 289 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 MTATP6P20-201ENST00000414147 562 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RPL23AP39-201ENST00000415533 405 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 EDDM3CP-201ENST00000415977 425 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AL353621.1-201ENST00000418219 243 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 CYCSP49-201ENST00000420810 319 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AL645568.3-201ENST00000433683 316 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AP000949.1-201ENST00000438328 629 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RPS15AP9-201ENST00000439856 381 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 EEF1A1P39-201ENST00000440791 250 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC007677.1-201ENST00000445757 515 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RPL23AP41-201ENST00000484754 458 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC096571.1-202ENST00000506634 735 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC021146.8-201ENST00000507455 733 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC012213.3-201ENST00000577199 777 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 MIR4782-201ENST00000577987 79 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 MIR4287-201ENST00000579398 78 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AC008749.1-201ENST00000597650 306 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 RNU6-88P-201ENST00000606801 100 ntBASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.57□□□□□ -2.16
ZIC4Q8N9L1 CDC27P3-201ENST00000635418 1910 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC002543.1-201ENST00000299783 1954 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC092125.1-201ENST00000562568 1995 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 Y_RNA.192-201ENST00000363977 102 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 SNORD48-201ENST00000364953 64 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 RPL7P34-201ENST00000433316 712 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AL353706.1-201ENST00000436728 494 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AL451074.3-201ENST00000437709 472 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 MTCO1P53-201ENST00000441633 699 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 BRK1P2-201ENST00000442875 223 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AL136380.1-201ENST00000447970 162 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC108059.3-201ENST00000456388 214 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 SNORA25.11-201ENST00000515935 105 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 DEFB108A-201ENST00000530110 222 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC090970.3-201ENST00000612566 866 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 MIR6134-201ENST00000617606 109 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC008555.8-201ENST00000623602 2168 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 TEX21P-201ENST00000447107 1476 ntBASIC1.56□□□□□ -2.16
ZIC4Q8N9L1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 MIR1305-201ENST00000408300 86 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AL358453.1-201ENST00000422522 250 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AL161788.1-201ENST00000441805 169 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 RPL23AP42-201ENST00000471152 471 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC104982.1-201ENST00000478775 574 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC055855.1-201ENST00000489563 579 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC116655.1-201ENST00000508324 901 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC010587.2-201ENST00000511727 448 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 RNA5SP137-201ENST00000516833 135 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 ACA59.2-201ENST00000517061 156 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 MTND1P36-201ENST00000522384 936 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms