Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
CCDC33Q8N5R6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC33Q8N5R6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC33Q8N5R6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC33Q8N5R6 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
CCDC33Q8N5R6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR412-201ENST00000362142 91 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 RNU1-73P-201ENST00000383971 164 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR634-201ENST00000385208 97 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AL353621.1-201ENST00000418219 243 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 ARL5AP1-201ENST00000418991 388 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 HSPE1P1-201ENST00000421494 318 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MTATP6P7-201ENST00000453315 681 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 snoU13.28-201ENST00000459235 104 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 RPL21P93-201ENST00000480465 489 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 SNORA31.19-201ENST00000517079 126 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 IGKV2-26-201ENST00000518305 343 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AF235103.2-201ENST00000525753 346 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 LRRC37A5P-203ENST00000580181 585 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR7112-201ENST00000616126 65 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 MIR8057-201ENST00000620957 69 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AC006504.8-201ENST00000621046 635 ntBASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC33Q8N5R6 AC110774.1-201ENST00000623567 2018 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 SRP72P2-201ENST00000344851 1979 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 SNORD3E-201ENST00000362899 217 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 U3.12-201ENST00000364498 214 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 U3.19-201ENST00000390893 196 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 NDUFS5P4-201ENST00000412983 318 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 Z99755.1-201ENST00000414048 380 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 BX682237.1-201ENST00000415016 335 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AL139413.1-201ENST00000421309 217 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AL714022.1-201ENST00000439897 151 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 RPL37P4-201ENST00000448908 268 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 RNU6-1208P-201ENST00000459588 107 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC026801.1-201ENST00000497178 464 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC093663.1-201ENST00000497190 394 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 RNU1-103P-201ENST00000516502 125 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC090115.3-201ENST00000553218 849 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC012119.1-201ENST00000603184 222 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 RMST_4.1-201ENST00000616886 107 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 AC099654.14-201ENST00000638599 341 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 MAPK10-362ENST00000641864 4484 ntBASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC33Q8N5R6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 MTND5P7-201ENST00000413558 1798 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 AC233263.6-201ENST00000631132 1963 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.167-201ENST00000363735 109 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.378-201ENST00000365652 113 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 Y_RNA.390-201ENST00000383932 102 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 SNORA11.2-201ENST00000408318 127 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 RNU6-607P-201ENST00000411283 108 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 AC096664.2-201ENST00000411843 406 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 HMGB1P9-201ENST00000429856 646 ntBASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC33Q8N5R6 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms