Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU6-1197P-201ENST00000391183 107 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 MIR1271-201ENST00000408537 86 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 HMGN2P30-201ENST00000423237 256 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX5Q8N196 RPL19P16-201ENST00000433839 588 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 CYCSP32-201ENST00000440548 321 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX5Q8N196 AC000111.2-201ENST00000448200 210 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 NDUFS5P3-201ENST00000450668 321 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC091167.1-201ENST00000492017 396 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC091868.1-201ENST00000508746 304 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC015795.1-201ENST00000513669 327 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 SNORA31.9-201ENST00000516429 84 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 MIR2116-201ENST00000517221 80 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX5Q8N196 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX5Q8N196 AC034105.4-201ENST00000568304 277 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX5Q8N196 MIR3138-201ENST00000585238 82 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AC037487.3-201ENST00000606668 112 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 AL022401.1-201ENST00000619498 108 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIX5Q8N196 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX5Q8N196 RAD17P1-201ENST00000418130 2042 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.9□□□□□ -1.63
SIX5Q8N196 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIX5Q8N196 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX5Q8N196 AL353743.1-202ENST00000431724 1695 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SIX5Q8N196 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX5Q8N196 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX5Q8N196 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX5Q8N196 SNORD115-32-201ENST00000364079 82 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 RNU6-898P-201ENST00000365627 104 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 RNU6-541P-201ENST00000384709 110 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SIX5Q8N196 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX5Q8N196 AC092047.1-201ENST00000424997 240 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AC011742.1-201ENST00000431448 434 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX5Q8N196 RPS15AP7-201ENST00000439294 405 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AL691482.1-201ENST00000453255 87 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 MTATP6P7-201ENST00000453315 681 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AL136097.1-201ENST00000456945 913 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX5Q8N196 RNU1-103P-201ENST00000516502 125 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 RNU6-703P-201ENST00000516946 107 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AP006245.1-201ENST00000522549 120 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 H3F3AP1-201ENST00000559984 334 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 RPL23AP88-201ENST00000605759 454 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AC024581.2-201ENST00000619986 252 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 AP005019.3-201ENST00000620418 560 ntBASIC4.89□□□□□ -1.63
SIX5Q8N196 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SIX5Q8N196 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX5Q8N196 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX5Q8N196 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX5Q8N196 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX5Q8N196 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX5Q8N196 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX5Q8N196 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 AL672167.1-204ENST00000641875 3017 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 FTLP6-201ENST00000355274 422 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 RNU6-142P-201ENST00000384019 107 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 AL139156.1-201ENST00000412785 841 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 RPL7AP49-201ENST00000429522 581 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 AL591438.1-201ENST00000433508 581 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 OR4C10P-201ENST00000434991 931 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 AC016700.2-201ENST00000446011 156 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 NUTF2P3-201ENST00000448540 384 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX5Q8N196 RPL30P5-201ENST00000494923 336 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 RNU6-496P-201ENST00000516145 99 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 RNU1-6P-201ENST00000516290 144 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 IGLVIV-65-201ENST00000517313 360 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX5Q8N196 MIR4429-201ENST00000580105 73 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX5Q8N196 AL121932.1-201ENST00000605542 214 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX5Q8N196 LINC00901.1-201ENST00000617252 152 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 AC034229.5-201ENST00000624258 185 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.88□□□□□ -1.63
SIX5Q8N196 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SIX5Q8N196 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms