Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNORA75-201ENST00000384158 137 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-348P-201ENST00000384386 107 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RPL26P27-201ENST00000414397 437 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AL109913.1-201ENST00000421173 514 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 MTCO2P34-201ENST00000421994 607 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 BPY2DP-201ENST00000422208 265 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RPS15AP5-201ENST00000436276 388 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RPL23AP45-201ENST00000476406 468 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RPS15AP34-201ENST00000487776 387 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RPS27AP10-201ENST00000496103 208 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC105252.1-201ENST00000503089 286 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC009901.1-201ENST00000506703 541 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-914P-201ENST00000516749 109 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC090572.1-201ENST00000519251 160 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC022634.1-201ENST00000520765 532 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 SUB1P1-201ENST00000524415 382 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC006362.1-201ENST00000567392 174 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 MIR4528-201ENST00000577763 90 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC010620.2-201ENST00000600135 313 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AL355598.1-201ENST00000604169 202 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AL049779.4-201ENST00000604500 156 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RN7SKP299-201ENST00000606679 301 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC006566.1-201ENST00000608943 513 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 AC109347.2-201ENST00000610220 349 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C9orf40Q8IXQ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC092435.3-201ENST00000565538 3654 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MTND4P35-201ENST00000604257 1375 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MIR449A-201ENST00000362113 91 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MIR301A-201ENST00000385261 86 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL162578.1-201ENST00000406202 378 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC023141.4-201ENST00000412031 328 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL353729.1-201ENST00000425044 720 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 HMGB1P9-201ENST00000429856 646 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL591704.1-201ENST00000432574 275 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 KLF3P2-201ENST00000465138 268 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC133134.1-201ENST00000466800 359 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC108078.2-201ENST00000510750 236 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MTCO3P28-201ENST00000513351 515 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC022447.1-201ENST00000515358 464 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC109329.2-201ENST00000519658 482 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AP003122.3-201ENST00000526316 255 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC084851.1-201ENST00000529105 249 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 NACAP3-201ENST00000552100 481 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC025281.1-201ENST00000567026 265 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC012213.3-201ENST00000577199 777 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC005498.1-201ENST00000592125 465 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL355877.2-201ENST00000603670 358 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AL121992.2-201ENST00000606262 256 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 MIR15A-201ENST00000607334 83 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC098614.4-201ENST00000607601 462 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC011939.3-201ENST00000613686 466 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC072046.2-201ENST00000618366 268 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 UCA1.1-201ENST00000620952 75 ntBASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C9orf40Q8IXQ3 AC110491.1-201ENST00000562191 2010 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 NACAP2-201ENST00000318548 624 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms