Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL354950.2-201ENST00000617939 290 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 OR4G2P-201ENST00000328113 903 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RNA5SP432-201ENST00000362480 116 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RNU1-73P-201ENST00000383971 164 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AL445529.1-201ENST00000398713 389 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AL590002.1-201ENST00000406554 418 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RPL7P54-201ENST00000438336 674 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AL714022.1-201ENST00000439897 151 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AL135938.1-201ENST00000443141 297 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RNU6-261P-201ENST00000459506 102 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC117522.3-201ENST00000507974 584 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC114786.4-201ENST00000508771 728 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC098591.2-201ENST00000510152 315 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 RN7SKP272-201ENST00000516988 232 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 MTCO3P24-201ENST00000572729 782 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 MIR548AC-201ENST00000585049 88 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC126118.1-201ENST00000607744 628 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 U6.99-201ENST00000637524 83 ntBASIC3.37□□□□□ -1.87
HERC6Q8IVU3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
HERC6Q8IVU3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RNU6-799P-201ENST00000363567 107 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL591416.1-201ENST00000404015 867 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL353193.1-201ENST00000421444 268 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL606489.2-201ENST00000433886 234 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 BRK1P2-201ENST00000442875 223 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC093392.2-201ENST00000450682 337 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC233702.1-201ENST00000482905 502 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL163973.1-201ENST00000484753 577 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RPL36AP51-201ENST00000487216 318 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.693-201ENST00000516641 110 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC104383.1-201ENST00000530297 370 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC136619.2-201ENST00000563361 631 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 HMGB1P33-201ENST00000563485 527 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 AC092794.1-201ENST00000612734 582 ntBASIC3.36□□□□□ -1.87
HERC6Q8IVU3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERC6Q8IVU3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 NACAP2-201ENST00000318548 624 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 RNU6-550P-201ENST00000391057 101 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 RNA5SP354-201ENST00000391247 136 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 CALM2P3-201ENST00000400429 449 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL353729.1-201ENST00000425044 720 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 SNRPFP3-201ENST00000457792 225 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL162395.1-201ENST00000457882 422 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC083798.1-201ENST00000472671 131 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC104136.1-201ENST00000512969 394 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms